Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0058 ATGCTTATATTAGTGGGCAACGTTCAAGGAACAATGGCTTCTTTTGCTTCCCCAGTCAGTTTCGGAGGTCTAGTTGGAGTTAGTTCCTCTGGAAGGACCCGTTCTTTGGGAAAGAGAGTTTCCCTTTGTAGAGGAAACTTCAAGGGTGGAAAGAGATGGCATTGTGTCTCCTTGTCTGTTTGTAGATATTCAGTCATCACAACTGATTTCATATCTGACCAAGGCAATGCAGTGTCCCTTGACTCTAACGGTGATAGAGGAAGTAAAGGTACTGGAGAGGGTAATGCAGGTTTTGTCCTTAAGCCTCCTCCAAAGCCAGTATTGAAGTCCTCGGAGAACAAGGCTGACCCCATTTCAGGCATGAAATATGAAGGGAGGGATCCCTCTGGAGCTAAAGAGAGGAATAAAGTAATTGAGTCACTTGGAGAGGTGTTGGAGAAGGCTGAAAAGCTGGAAAGTCCAAAGTTGGATGCTAAAAGAAATAATGGACCTGTAAATAAACCAGCAATATCTAATAAAATCACTAATCCTAAGCCAGAAAAAATGGTAGATTCAACAGCAAACCAGAAGTCTAGAACTGCGAAGAGTGTATGGCGTAAAGGGGACACAGTTGCTAATGTGCAGAAGGTTGTAAAGGAAGCACCCAAGCCTAGTACTAAGAATGAAGGAGAGAAATCCCAAACAGGGGAAGGAGGAAGGGTAACATCACAATGGCGTGCTCCTCCAAGAGGTCCTCAGCCACTGTCAAGGCCTCAGCCAATGTTACAAGCTAAACCTTCTGTAGCTCCACCACCCATCAAAAAGCCTATTTTGAAGGACAATGGAGCAGCTGGTGCACCtgttaaaaataaagaaagaaagccaATTTTGATCGACAAGTTTGCTACCAAGAAACCAGTAGTTGATCCTCTCATTGCTCAAGCAGTTCTAGCCCCTCCAAAACCAGGAAAGGCCCCTCCCCCAGGAAAGTTTAAAGATGAATACCGAAAGAAAAGTGCTCCAGCTGGAGGCCCAAGGAGACGAGTATTGGCAGATGACGATGATGAGATTCCTGATGAGGACACATCAGAACTCAATGTCTCTATTCCTGGTGCTGCAACAGCTAGAAAAGGGAGGAAATGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTACAGGCTGCCAAGGAGGCAGCTCCTGTCAAAGTAGAAATTCTAGAGGTCAGTGACAAAGGTATGCTGATAGAGGAGTTAGCCTATAACTTGGCAATCAGTGAAGGTGAAATCCTGGGTTATCTATACGCCAAGGGGATTAAACCAGATGGGGTGCAAACTCTGGACAAAGATATGGTGAAGATGATTTGTAAAGAGCAAGGTGTGGAGGTCATAGATGCTGATCCTCTCAAAGTTGAAGGATTGGTTAAAAGAAGAGATATTCTTGATGAAGATGATCTTGAAAAACTCAAAGATAGGCCACCTGTCATTACTATAATGGGTCATGTAGATCATGGCAAGACGACTCTCTTGGATCATATTCGGAAGAGCAAGGTAGTTGCTTCAGAAGCTGGTGGGATTACACAAGGAATTGGGGCATATAAAGTGCAAGTACCTGTTGATGGCAAACTGCTGCCTTGTGTTTTTCTCGACACTCCTGGGCATGAGGCGTTTGGGGCAATGAGAGCTCGAGGAGCAAGTGTAACAGATATTGCTATCATTGTTGTGGCTGCTGATGATGGAATTCGTCCTCAAACAAATGAAGCCATTGCTCATGCAAAAGCAGCAGGAGTACCAATAATTATTGCTATAAACAAGATAGACAAAGATGGAGCAAGTCCTGAACGAGTCATGCAAGAGCTTTCTTCAATTGGTCTAATGCCAGAAGAATGGGGTGGTGACATCCCAATGGTTCAGATAAGTGCTCTTAAAGGGGAGAACGTAGATGATCTTTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCAAATCCTGATAGAAATGCGAAGGGCACAGTTATTGAGGCAGGTCTGGATAAATCGAAAGGACCATTTGCTACATTTATCGTGCAGAATGGCACTCTTAAAAGGGGAGATGTAGTTGTTTGCGGAGAAGCTTATGGAAAGGTTCGGGCTTTATTTGATGATGGTGGAAAGCGTGTTGATTCAGCTGCACCCTCAATACCTGTACAGGTTATTGGATTGAATAACGTTCCAATTGCCGGTGATGAATTTGAGGTTGTTGACTCCCTTGATGCTGCGCGTGAAAAGGCTGAGTCCCGTGCTGAATCATTGAGAAATGAGCGTATTTCAGCTAAGGCAGGGGATGGCAAGGTCACTCTTTCTTCTTTAGCATCTGCAGTTTCATCCGGAAAGCTTTCTGGCTTAGACTTGCACCAACTAAACATTATCTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTATCAGACAAGCCCTGCAGGTGCTACCACAAGATAATGTCACATTGAAGTTTTTGTTGGAAGCAACAGGTGATGTAAGCACCAGTGATGTTGACCTTGCAGTTGCAAGCAAAGCTAttattttgggatttaatgtcAAAACACCAGGTTCTGTAAAAAGCTATGCAGAGAACAAATTAGTTGAGATCAGATTATATAGAGTTATTTATGAACTGATTGATGATGTGCGGAATGCAATGGAAGGACTTCTGGAGCCTGTTGAGGAACAAGTAACAATTGGCTCAGCAGAAGTAAGGGCCACATTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGGTTACGGAGGGAAAAATACAACAAGACTGTGGCATTCGGGTCATTCGTAAGGGAAAAGTAGTTCATGTTGGTATTCTTGATTCTTTGAGACGGGTGAAGGAGATTGTGAAAGAGGTAAATGCGGGTCTAGAGTGTGGAATTGGGTTAGAAGATTACGACAATTGGGAAGAGGGAGATATTCTCGAGGCATTCAATACAGTTCAGAAGAAGCGGACGCTTGAAGAGGCATCAGCCTCAATGGCAGCCGCAGTGGAAGGAGTGGGAGCCGAATTGTAG 3036 0.4381 MLILVGNVQGTMASFASPVSFGGLVGVSSSGRTRSLGKRVSLCRGNFKGGKRWHCVSLSVCRYSVITTDFISDQGNAVSLDSNGDRGSKGTGEGNAGFVLKPPPKPVLKSSENKADPISGMKYEGRDPSGAKERNKVIESLGEVLEKAEKLESPKLDAKRNNGPVNKPAISNKITNPKPEKMVDSTANQKSRTAKSVWRKGDTVANVQKVVKEAPKPSTKNEGEKSQTGEGGRVTSQWRAPPRGPQPLSRPQPMLQAKPSVAPPPIKKPILKDNGAAGAPVKNKERKPILIDKFATKKPVVDPLIAQAVLAPPKPGKAPPPGKFKDEYRKKSAPAGGPRRRVLADDDDEIPDEDTSELNVSIPGAATARKGRKWSKASRKAARLQAAKEAAPVKVEILEVSDKGMLIEELAYNLAISEGEILGYLYAKGIKPDGVQTLDKDMVKMICKEQGVEVIDADPLKVEGLVKRRDILDEDDLEKLKDRPPVITIMGHVDHGKTTLLDHIRKSKVVASEAGGITQGIGAYKVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGASPERVMQELSSIGLMPEEWGGDIPMVQISALKGENVDDLLETVMLVAELQELKANPDRNAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDVVVCGEAYGKVRALFDDGGKRVDSAAPSIPVQVIGLNNVPIAGDEFEVVDSLDAAREKAESRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAIRQALQVLPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVKTPGSVKSYAENKLVEIRLYRVIYELIDDVRNAMEGLLEPVEEQVTIGSAEVRATFSSGSGRVAGCMVTEGKIQQDCGIRVIRKGKVVHVGILDSLRRVKEIVKEVNAGLECGIGLEDYDNWEEGDILEAFNTVQKKRTLEEASASMAAAVEGVGAEL 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0058 1011 Gene3D Translation factors 896 992 - -
Sto7g0058 1011 Pfam Elongation factor Tu GTP binding domain 487 647 IPR000795 GO:0003924|GO:0005525
Sto7g0058 1011 SUPERFAMILY Translation proteins 658 741 IPR009000 -
Sto7g0058 1011 MobiDBLite consensus disorder prediction 165 194 - -
Sto7g0058 1011 PRINTS GTP-binding elongation factor signature 486 499 IPR000795 GO:0003924|GO:0005525
Sto7g0058 1011 PRINTS GTP-binding elongation factor signature 538 548 IPR000795 GO:0003924|GO:0005525
Sto7g0058 1011 PRINTS GTP-binding elongation factor signature 554 565 IPR000795 GO:0003924|GO:0005525
Sto7g0058 1011 PRINTS GTP-binding elongation factor signature 590 599 IPR000795 GO:0003924|GO:0005525
Sto7g0058 1011 MobiDBLite consensus disorder prediction 152 289 - -
Sto7g0058 1011 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 789 901 IPR036925 -
Sto7g0058 1011 CDD mtIF2_IVc 901 983 - -
Sto7g0058 1011 TIGRFAM small_GTP: small GTP-binding protein domain 484 645 IPR005225 GO:0005525
Sto7g0058 1011 Gene3D - 790 895 IPR036925 -
Sto7g0058 1011 TIGRFAM IF-2: translation initiation factor IF-2 404 993 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Sto7g0058 1011 CDD IF2_eIF5B 485 651 - -
Sto7g0058 1011 CDD IF2_mtIF2_II 662 756 IPR044145 -
Sto7g0058 1011 Hamap Translation initiation factor IF-2 [infB]. 7 991 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Sto7g0058 1011 SUPERFAMILY Translation proteins 897 991 IPR009000 -
Sto7g0058 1011 Gene3D Translation factors 658 774 - -
Sto7g0058 1011 MobiDBLite consensus disorder prediction 309 356 - -
Sto7g0058 1011 ProSitePatterns Initiation factor 2 signature. 944 966 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Sto7g0058 1011 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 482 655 IPR000795 GO:0003924|GO:0005525
Sto7g0058 1011 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 37 1001 - -
Sto7g0058 1011 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 37 1001 IPR015760 -
Sto7g0058 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 475 658 IPR027417 -
Sto7g0058 1011 Gene3D - 479 657 IPR027417 -
Sto7g0058 1011 MobiDBLite consensus disorder prediction 76 133 - -
Sto7g0058 1011 Pfam Translation-initiation factor 2 790 883 IPR023115 -
Sto7g0058 1011 Coils Coil 741 768 - -
Sto7g0058 1011 MobiDBLite consensus disorder prediction 320 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0058 Sto-Chr7 488624 497256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0058 461 881 Eukaryotic Initiation Factors Gene Family AT1G76810 29.615 2.25e-28 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0058 7 488624 497256 Sto7g0058 7 488624 497256 ECH