Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g0048 ATGAGCAACATAAGCATGGTAGAGGCAAAGTTACCGCCTGGGTTTAGGTTTCATCCCAGAGATGAAGAACTCGTCTGTGATTACTTAATGAAGAAGGTGACTCACTCTGACTCTTCCCTCATGATTGATGTTGATCTTAACAAGTGTGAGCCATGGGACATTCCTGAAACAGCCTGTGTAGGAGGGAAGGAGTGGTATTTCTACACACAGCGAGACCGCAAGTATGCCACTGGTCTACGCACAAATCGTGCCACTGCCTCAGGCTATTGGAAAGCCACAGGGAAGGACAGGCCTATCCTTCGCAAGGGCACACTTGTAGGTATGAGGAAGACTTTGGTGTTCTATCAAGGAAGAGCACCCAAAGGGAGAAAGACCGAATGGGTCATGCATGAATTTCGCCTTGAAGGTCCCTTTGGCCCTCCTAAAATTTCTTCAACCAAGGAGGATTGGGTTCTGTGCAGGGTGTTCTACAAAAACAGAGAAATTTCAACGAAACAGAGCATGGGAAGCATCTACGATGACACAGGCTCTTCATCTCTTCCTGCATTAATGGATTCTTACATCAGCTTCGATCAACAAGCCCATCTAGATGAATACGAGCAAGTGCCCTGCTTCTCCATTTTCTCACAAACCCAATCAAACCCTAATTTCAACCACACAACCATTATGGATCCAAATTTGTTATTACCTGCCGCTGCCAAGAATCATAATAATACTAACAATGTGACAGCCACATATGGAGGAACAACAACAATACCTTACAATTTGGGTTCTTCTTGCTTGGACCCTAATTTCTCGTGTGATAGAAAGGTATTGAAAGCTGTTCTGAGTCAACTCAGCAAGATGGAAAGAGACCAACATATTCCAATTAGTACTCTCAAGGATTCACCAAGCTTAGGGGAAGGAAGTTCAGAGAGTTATTTATCTGAAGTGCCTATTCCCAACTTATGGAACAATTTCTGa 963 0.4393 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSSLMIDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLEGPFGPPKISSTKEDWVLCRVFYKNREISTKQSMGSIYDDTGSSSLPALMDSYISFDQQAHLDEYEQVPCFSIFSQTQSNPNFNHTTIMDPNLLLPAAAKNHNNTNNVTATYGGTTTIPYNLGSSCLDPNFSCDRKVLKAVLSQLSKMERDQHIPISTLKDSPSLGEGSSESYLSEVPIPNLWNNF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g0048 320 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Sto7g0048 320 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
Sto7g0048 320 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN 3 212 - -
Sto7g0048 320 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Sto7g0048 320 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Sto7g0048 320 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g0048 Sto-Chr7 437995 441664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g0048 2 318 NAC Transcription Factor Family AT1G56010 57.186 2.08e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto7g0048 NAM 8.7e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0048 7 437995 441664 Sto7g0048 7 437995 441664 ECH