Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2963 ATGGAACACAAAGACAAAGCAAAAGCAGAATTACCAGAAGCAGCTGCTGCATCCTCTCGCTCTGCCACTGCCTTCACCACCGACGACTCCTCCAGCTGGGCCCTCGGCGGCCACGATGACGCCGACGCCGACGCCGGCGTCTATTTCTTCTCCGGCGACCGACACAACAGCAGTATACTCGGCGAGTTCGGGTGGAATCTCGACCCGGAGCAACCGCGCCGGATCGGTGGAGGAGAAGGCGGAGGAGGCTTTTGGTTCCCGGCTCATGATGACTCTGCTCCGGCCGACAAGGCGGCGGCGGCTGCTGCTGACGTGTCGACGACGTCGATTAATCAATCGGTATCATCGAGCTCCAGCGAGGATCCGGCGGAGAAGTCCACCGTCGTCTCAGACGAGAAACCGGCGGCGGAGATACCgAGTAAAAGTAAAAAGAAGGGGCAAAAGAGAGTACGGCAGCCACGGTTTGCATTTATGACCAAGAGTGAAGTCGATCATCTTGAGGATGGCTACAGATGGCGCAAGTATGGTCAAAAGGCAGTAAAAAATAGCCCATTTCCTAGGAGCTACTATCGTTGCACAAACAGCAAATGCACGGtgaagaaaagggtggaacgctcgtCGGAGGACCCATCCATTGTGATAACCACATACGAAGGCCAACACTGTCACCACACTGTTGGTTTCCCCCGAGCGGCCGGAGCTGGAATCATTAGCCATCACGAGGCTGCGGCTTTCGCTGCTGCCACTGCCACTGCCACCCACATTCCTCCTACAATGTCATTATCACAATTCTATAACAACAATTATCCCACCATCCAATTACCAAGAGATCATCAAAACACTACTACTACTAGTCTTACTATTTCCCACCCTCCTCATCctcacactcacactcacacccatggccatcatcatcatcatcatcatgaacaAGCTTCAGGagcaggaggaggaggagggggagGATCTTCCAGCACTGTAGTAATGCCAGATCATGATCATGATGCAGCCTCCTCACACCACCCTCCCACCGATGAAGGACTCCTCGGAGACATCGTGCCACCGGGAATGCGTAACAGATGA 1083 0.4912 MEHKDKAKAELPEAAAASSRSATAFTTDDSSSWALGGHDDADADAGVYFFSGDRHNSSILGEFGWNLDPEQPRRIGGGEGGGGFWFPAHDDSAPADKAAAAAADVSTTSINQSVSSSSSEDPAEKSTVVSDEKPAAEIPSKSKKKGQKRVRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPSIVITTYEGQHCHHTVGFPRAAGAGIISHHEAAAFAAATATATHIPPTMSLSQFYNNNYPTIQLPRDHQNTTTTSLTISHPPHPHTHTHTHGHHHHHHHEQASGAGGGGGGGSSSTVVMPDHDHDAASSHHPPTDEGLLGDIVPPGMRNR 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2963 360 SMART WRKY_cls 166 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g2963 360 MobiDBLite consensus disorder prediction 1 38 - -
Sto6g2963 360 MobiDBLite consensus disorder prediction 109 124 - -
Sto6g2963 360 MobiDBLite consensus disorder prediction 109 151 - -
Sto6g2963 360 MobiDBLite consensus disorder prediction 294 310 - -
Sto6g2963 360 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 241 IPR044810 GO:0003700
Sto6g2963 360 MobiDBLite consensus disorder prediction 125 143 - -
Sto6g2963 360 ProSiteProfiles WRKY domain profile. 161 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g2963 360 MobiDBLite consensus disorder prediction 19 33 - -
Sto6g2963 360 MobiDBLite consensus disorder prediction 272 360 - -
Sto6g2963 360 MobiDBLite consensus disorder prediction 272 293 - -
Sto6g2963 360 Pfam WRKY DNA -binding domain 167 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g2963 360 SUPERFAMILY WRKY DNA-binding domain 158 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g2963 360 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 24 241 - -
Sto6g2963 360 Gene3D WRKY domain 153 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2963 Sto-Chr6 36792246 36795486 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto6g2963 WRKY 1.6e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2963 6 36792246 36795486 Sto6g2963 6 36792246 36795486 ECH