Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2959 atgGTGAAAATTTGCTGCATTGGAGCTGGATATGTGGGTGGGCCCACCATGGCTGTGATTGCCCTCAAGTGTCCTGAGATTGAAGTGGCTGTAGTGGATATCTCTGCACCCAGAATCAATGCCTGGAACAGCGATCAGCTTCCCATCTACGAGCCGGGGCTCGAGGCCGGGAAAGCTGCCGATCTAACCTACTGGGAGAGCGCGGCTCGGATGATTGCTGATGTTTCGACATCTGACAAAATTGTGGTTGAGAAATCAACTGTCCCTGTGAAAACTGCTGAGGCAATTGAGAAGATTCTCACTCACAACAGGAAAGGCATCAATTTCTCAATTCTGTCGAACCCGGAGTTTCTTGCTGAGGGTACAGCAATTAAGGATCTGTTTCATCCAGATCGTGTCCTCATCGGAGGTAGGGAGACCCCGGAAGGTACGAAGGCCATACAAGCTCTGAAAGATGTTTATGCTCATTGGGTTCCTGTTGATAGAATCCTTTGCACAAACTTGTGGTCTGCTGAATTGTCAAAGCTGGCTGCCAATGCTTTTCTGGCACAGAGGATCTCTTCTGTGAATGCCATGTCAGCACTGTGTGAGGCGACCGGTGCCGATATCTCCCAGGTGTCGCACTCGGTCGGGACAGACTCAAGAATTGGACCAAAGTTCTTGAATGCGAGTGTTGGCTTTGGTGGATCCTGTTTCCAAAAAGATATCCTGAACCTAGTTTACATCTGTGAATGCAATGGCCTTCCTGAGGTAGCAAATTACTGGAAACAGGTGATCAAGGTGAACGACTATCAGAAAACCCGGTTTGTGAACCGCGTGGTTTCCTCCATGTTCAACACCGTGTCGGGCAAGAAAATCGCCGTTCTGGGTTTCGCCTTCAAGAAAGACACCGGCGACACCAGGGAGACCCCGGCCATTGACGTGTGCAAGGGGCTGCTAGGGGACAGGGCCCGGTTGAGCATATACGACCCGCAGGTCACCGAGGACCAAATCTTCAGGGATCTCTCAATGAAGAAGTTCGATTGGGACCACCCGGCTCATCTTCAACCGATGAGCCCGACCTCGGTCAAGCAAGTATCAGTCACTTGGGATGCCTACGAGGCGACAAAAGATGCTCATGGAATCTGCGTTCTGACCGAGTGGGACGAGTTCAAGAATCTTGATTACCAGAGAATCTATGACAATATGCCAAAGCCTGCATTTGTGTTTGATGGAAGGAATGTGGTGGATGTAGAGAAGCTGAGGAAGATTGGGTTTATAGTGTATTCCATTGGGAAGCCACTAGATCCATGGCTGAAGGACATGCCTGCTGTGGTGGCatga 1323 0.5004 MVKICCIGAGYVGGPTMAVIALKCPEIEVAVVDISAPRINAWNSDQLPIYEPGLEAGKAADLTYWESAARMIADVSTSDKIVVEKSTVPVKTAEAIEKILTHNRKGINFSILSNPEFLAEGTAIKDLFHPDRVLIGGRETPEGTKAIQALKDVYAHWVPVDRILCTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADISQVSHSVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKTRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDRARLSIYDPQVTEDQIFRDLSMKKFDWDHPAHLQPMSPTSVKQVSVTWDAYEATKDAHGICVLTEWDEFKNLDYQRIYDNMPKPAFVFDGRNVVDVEKLRKIGFIVYSIGKPLDPWLKDMPAVVA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2959 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 173 IPR036291 -
Sto6g2959 440 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 169 268 IPR008927 -
Sto6g2959 440 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 274 422 IPR036220 -
Sto6g2959 440 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 57 143 IPR001732 GO:0016616|GO:0051287
Sto6g2959 440 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 55 IPR001732 GO:0016616|GO:0051287
Sto6g2959 440 PIRSF UDPglc_GDPman_dh 55 426 IPR017476 GO:0016616
Sto6g2959 440 PIRSF UDPglc_GDPman_dh 2 57 IPR017476 GO:0016616
Sto6g2959 440 PIRSF UDPglc_DH_euk 1 56 IPR028356 GO:0003979
Sto6g2959 440 PIRSF UDPglc_DH_euk 55 438 IPR028356 GO:0003979
Sto6g2959 440 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 287 410 IPR014027 GO:0016616|GO:0051287
Sto6g2959 440 SMART UDPG_MGDP_dh_C_a_2_a 287 411 IPR014027 GO:0016616|GO:0051287
Sto6g2959 440 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 55 IPR028356 GO:0003979
Sto6g2959 440 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 53 439 IPR028356 GO:0003979
Sto6g2959 440 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 2-RELATED 53 439 - -
Sto6g2959 440 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 2-RELATED 1 55 - -
Sto6g2959 440 Gene3D - 57 167 - -
Sto6g2959 440 Gene3D - 1 56 - -
Sto6g2959 440 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 169 263 IPR014026 GO:0016616|GO:0051287
Sto6g2959 440 Gene3D - 168 199 - -
Sto6g2959 440 Gene3D - 200 436 - -
Sto6g2959 440 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 58 407 IPR017476 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2959 Sto-Chr6 36761494 36762939 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2959 6 36761494 36762939 Sto6g2959 6 36761494 36762939 ECH
Sto6g2959 6 36761494 36762939 Sto13g1831 13 25687444 25688886 ECH