Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2857 TTGGTTTCGGTTGGTGAAGTTTGGTGGAAGCAGCTTTCTTCATCATCTGAAGCTTTCAGCTTAGATAGTTCAACCTCACCGCCGCCGCCGACATCTTCAAGCCCGCCATCGCAGTCCCCACCTCCGGCAGCGCCACCTCCTGCTGTGGTGTCCCCTCCGCCACCGGTAGTATCGGACCCTACGCCATCACAGCCACCTCAATCATCACCTCCCCCTCCATCTGGGACTCCACCCCCATCGTCACCCCCTGtagcttctcctcctcctccacaaTCAGCACCACCGCCAGCATCCCCTAATGCTCCCCCTCCATCTTCTCCTGTACCTCCATCACCGCCTCCCCCTGTAAGTCCTCCCCCTCCAACAAATTCATCTGCGCCTCCACCATCtaacccaccaccaccaccgtcgGCAAACCCTCCAAGCAACTCACCTCCACCTCCAGCATCAACGCCCCCTGAAAATTCACCCCCTCCTTCAGCAGTTGTGCCACCCCCTGCAAATTCACCTCCACCACCAGCATCTGCGCCACCACCAAAGAATTCACCCCCTCCACCAGCAGCTGTGCCGCCGCAAGGGTCATCTCCTCCACCTCCGGCATCATCCCCTCCTAGAAATTCACCTCCTCCTCCAGCTTCTGAACCTCCAAGTAGTGCACCCCCTCCCCCTAGGATAAATCCTCCTCCACCCAGTTCTCCACCAAATTCATCTCCTTCAAATTCTACACCAAAATCATCTCCTCCGCCTCCCATTAATCGATTGGCTCCACCTCCAACCTCACTTGTTTCACCACCAGCTTCTCAGACGCCCTCCCCGCCATCAGAAAATGGGGCAGAAAGTCCGGAATCCAGTGGTAGCAGTGGCATTGGCACTGGTGGTATAGTGGCCTTTGGTGTAGGAGGAGGGATTCTATTGCTCACCTTAATTGGAATTGTTATCTGGTGCATGAGGAGGCAGAAGAAGCGGAAGCCTGGGAATGGTGGTTATATCATGCCATCTACTATTGGCTCACCACCTGACTCAGATTCTTCCTTTTTTAAGACACATTCTTCAGCTCCCCTAGTACAAAGCGGTTCTGGTAGTGATACTGTGACTGTGTACACACCATCTGAGCCTGGCGGACTAGGCAACTCAAGGTCATGGTTTACATATGAAGAACTAGTCAAGGCGACAAATGGTTTTTCACCGCAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGATACCTACCTGATGGAAGAGAGATAGCTGTCAAACAGCTTAAAATTGGTGGAGGTCAGGGTGAGAGAGAATTCAAAGCTGAAGTGGAGATTATTAGTCGTATTCATCATCGCCATTTGGTTTCTTTGGTGGGATACTGCATTTTAGATAGCAGAAGGCTGCTTGTCTATGACTATGTCCCTAACAATACCCTGTACTATCATCTTCACGGGGAAGGTAAGCCAGTATTGAGCTGGGAAAAACGTGTGAAAATTGCCTCTGGTGCAGCTCGAGGAATTGCTTATCTTCATGAAGACTGCAATCCTCGGATTATTCACAGGGATATTAAGTCATCAAACATTCTTTTAGACTACAACTTTGAAGCCCAAGTCTCAGACTTTGGGTTAGCCAAATTAGCTCTTGATGCCAATACACACATAACCACTCGTGTCATGGGAACTTTTGGATATGTTGCACCTGAATATGCATCAAGTGGTAAATTGACTGAGAAGTCTGATGTATATTCTTTTGGAGTTGTGCTTCTGGAGCTCATTACTGGACGGAAACCAGTAGATGCGTCTCAACCCTTGGGGGATGAGAGTCTAGTTGAATggGCTCGACCTCTGCTGAATCATGCACTTGATAATGAGGAATTTGACGGTTTGGTAGATCCTAGGCTTGGAAGGAACTATGTTGAAAGTGAGATGTTCCGCATGATTGAAATTGCTGCTGCTTCGGTGAGGCATTTGGCTGCCAAGAGGCCTAGAATGGGACAGGTCGTTAGAGCTTTTGACAGCTTAGCAACTTCAGATATAACAAACGGAATGAGACCAGGGGAAAGCGAGGCATTCAACTCAGCGCTGCAATCAGAAGAAATAAGATTGTTTCGGAGGATGGCGTTTGGTAGTCAAGATTATAGCACAGACTTTTTTAGCCAGTCTAGTTTGAATACATAA 2166 0.4792 LVSVGEVWWKQLSSSSEAFSLDSSTSPPPPTSSSPPSQSPPPAAPPPAVVSPPPPVVSDPTPSQPPQSSPPPPSGTPPPSSPPVASPPPPQSAPPPASPNAPPPSSPVPPSPPPPVSPPPPTNSSAPPPSNPPPPPSANPPSNSPPPPASTPPENSPPPSAVVPPPANSPPPPASAPPPKNSPPPPAAVPPQGSSPPPPASSPPRNSPPPPASEPPSSAPPPPRINPPPPSSPPNSSPSNSTPKSSPPPPINRLAPPPTSLVSPPASQTPSPPSENGAESPESSGSSGIGTGGIVAFGVGGGILLLTLIGIVIWCMRRQKKRKPGNGGYIMPSTIGSPPDSDSSFFKTHSSAPLVQSGSGSDTVTVYTPSEPGGLGNSRSWFTYEELVKATNGFSPQNLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCILDSRRLLVYDYVPNNTLYYHLHGEGKPVLSWEKRVKIASGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFEAQVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDASQPLGDESLVEWARPLLNHALDNEEFDGLVDPRLGRNYVESEMFRMIEIAAASVRHLAAKRPRMGQVVRAFDSLATSDITNGMRPGESEAFNSALQSEEIRLFRRMAFGSQDYSTDFFSQSSLNT 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2857 721 SUPERFAMILY Protein kinase-like (PK-like) 375 665 IPR011009 -
Sto6g2857 721 Gene3D Transferase(Phosphotransferase) domain 1 470 684 - -
Sto6g2857 721 MobiDBLite consensus disorder prediction 28 271 - -
Sto6g2857 721 MobiDBLite consensus disorder prediction 322 362 - -
Sto6g2857 721 PANTHER BNACNNG34790D PROTEIN 112 717 - -
Sto6g2857 721 SMART serkin_6 394 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2857 721 MobiDBLite consensus disorder prediction 272 287 - -
Sto6g2857 721 Gene3D Phosphorylase Kinase; domain 1 370 469 - -
Sto6g2857 721 CDD STKc_IRAK 400 670 - -
Sto6g2857 721 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 112 717 - -
Sto6g2857 721 MobiDBLite consensus disorder prediction 15 287 - -
Sto6g2857 721 ProSiteProfiles Protein kinase domain profile. 394 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2857 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 514 526 IPR008271 GO:0004672|GO:0006468
Sto6g2857 721 ProSitePatterns Protein kinases ATP-binding region signature. 400 422 IPR017441 GO:0005524
Sto6g2857 721 Pfam Protein tyrosine and serine/threonine kinase 398 596 IPR001245 GO:0004672|GO:0006468
Sto6g2857 721 MobiDBLite consensus disorder prediction 336 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2857 Sto-Chr6 35814665 35819740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2857 294 609 Trihelix Transcription Factor Family AT1G26150 72.327 8.11e-166 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Sto6g2857 PK_Tyr_Ser-Thr 7.5e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2857 6 35814665 35819740 Sto6g2857 6 35814665 35819740 ECH