Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2854 ATGGACGAGAACGGCAACGGCTACATCGAGTTCGACGAGTTGGCGAAGGCCATACTCGCTGACGTGTTCCGGGCCTTCGACCGCGACGGCAACGGCTACATCACGGCCGCCGAACTCGCGGGCTCCATGGCCAAGATGGGCCACCCCTTGACCTACCGCGAGCTCGCCGATATGATGAACGAGGCCGACACCAACGGGGACGGCGTCATAAGCTTTAGCGAGTTTGCAACCATCATGGCTAAGTCGGCCACAGATTTTCTTGGCCTCAAAGCTTCATGA 279 0.5914 MDENGNGYIEFDELAKAILADVFRAFDRDGNGYITAAELAGSMAKMGHPLTYRELADMMNEADTNGDGVISFSEFATIMAKSATDFLGLKAS 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2854 92 Pfam EF hand 1 16 IPR002048 GO:0005509
Sto6g2854 92 ProSitePatterns EF-hand calcium-binding domain. 27 39 IPR018247 -
Sto6g2854 92 PANTHER CALCIUM BINDING PROTEIN 1 90 - -
Sto6g2854 92 Pfam EF-hand domain pair 19 79 IPR002048 GO:0005509
Sto6g2854 92 SMART efh_1 18 46 IPR002048 GO:0005509
Sto6g2854 92 SMART efh_1 54 82 IPR002048 GO:0005509
Sto6g2854 92 CDD EFh 19 80 IPR002048 GO:0005509
Sto6g2854 92 ProSitePatterns EF-hand calcium-binding domain. 63 75 IPR018247 -
Sto6g2854 92 ProSiteProfiles EF-hand calcium-binding domain profile. 14 49 IPR002048 GO:0005509
Sto6g2854 92 Gene3D - 1 86 - -
Sto6g2854 92 SUPERFAMILY EF-hand 1 81 IPR011992 -
Sto6g2854 92 ProSiteProfiles EF-hand calcium-binding domain profile. 50 85 IPR002048 GO:0005509
Sto6g2854 92 PANTHER CALCIUM-BINDING PROTEIN CML15-RELATED 1 90 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2854 1 92 EF-hand Containing Proteins AT3G25600 69.811 7.57e-47 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2854 6 35801405 35801728 Sto6g2854 6 35801405 35801728 ECH