Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2852 atgAGGGGTGGGAAAAGAAGGAAGCTGCGTCTTAGCAAGATCTACTCATTCGCTTGTGGTAAGCGATCGTTTGAGGAAGACCATTCACAGATTGGGGGACGAGGTTATTCCAGGGTGGTGTTCTGCAATGAACCAGATAGCCTTGAGGCTGGAATTCGTAATTATGCCGATAATTCTGTCAGGTCTACGAAATATACTCTTGCTACCTTCTTGCCTAAATCACTATTCGAGCAGTTTAGGAGGGTggctaatttctttttcttagttACTGGAATTTTAGCCTTCACTCCACTTGCTCCCTATACAGCTGTTAGTGCCATTGTTCCTCTGATTATTGTTATTGGGGCAACCATGGTGAAAGAAGGTATTGAAGATTTGCGGAGGAAGAAGCAGGATATTGAGGTTAACAATAGAAGGGTTAAAGTGCATAAACACAATGGTGCATTTGAATATACTGAGTGGAAGAATCTGAGGGTGGGAGATATAGTGAAGGTACAGAAGGACGAGTTCTTTCCAGCAGACCTCCTATTGCTTTCATCCAGTTATGAAGATGCAGTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATCTCAAGttgaagcaagggttggaggtaACTTCTTCCTTGCGTGACGATCTTAACTTCTCTGATTTTAAAGCTACAATTAAATGTGAAGACCCAAATGCAAATTTGTACTCTTTTGTTGGGAGCATGGAGTTTGAAGAGCAACAGTATCCCCTTTCTCCTCAGCAACTTCTCCTGAGAGATTCTAAACTCCGTAATACAGATTACATATTTGGAGCTGTCATCTTCACTGGTCATGACACAAAGGTTATTCAAAATTCTACTGATCCCCCCTCAAAGAGAAGCAAAGTTGAGAAGAAGATGGATAGAATCATATACTTCTTGTTttgtattctatttttattggcATCTGTTGGATCTATTTTCTTTGGCATTTCAACTAAAGATGACTTGGAAAATGGGAAGATGAAAAGATGGTATCTAAGACCAGATGATTCTACAATTTTCTTTGATCCAAAAAGAGCACCAGCTGCTGCAATATTTCATTGTTTGACGGCCTTAATGTTGTATAACTACTTTATACCGATCTCCTTGTATGTATCAATAGAAATTGTCAAAGTCCTTCAGAGCATCTTCATCAATCAAGATATCTACATGTACTATGAGGAAGCAGACAAACCGGCTCGTGCCCGTACGTCAAATTTGAATGAAGAACTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTTTGACCTGCAACTCAATGGAGTTCATCAAATGTTCAATTGCTGGGGTGGCTTATGGCCGTGGTGTTACAGAGGTTGAGAAGGCTATGGACAGAAAAAGTGGTTCACCATTGATTCATGAACAAGATATTGGATCAGATGACATTAGGGATTCTTCTGTTGCAAAAGCGCCTATTAAAGGTTTTAATTTTATAGATGAAAGGATAATGGATGGAAACTGGGTTAATGAGCCTCATGCTGATGTAATTCAGAAGTTTTTTCGCTTATTAGCTACCTGTCATACAGCCATCCCTGAAGTGGATGAAGACACGGGAAATATCTCATATGAAGCTGAATCCCCAGACGAAGCAGCATTTGTGATTGCAGGAAGAGAACTTGGCTTTGAATTTTACAAAAGAACTCAGACCAGTTTATCAATGTATGAGTTGGATCCAGTTTCTGGCAAGAAAGTTGAAAGGACATATAAACTTCTCAGTGTTTTAGAATTCAACAGCTCGAGGAAGCGAATGTCGGTAATAGTAAAAGATGAAGAAGGGAAAATTTTTCTCTTCTGTAAAGGTGCTGACAGTGTAATGTTTGACAGGCTTGCCAAGAATGGGCGGGAGTTTGAAGAGAAAACCCTGGAACACGTGCAAGAATATGCTGATGCAGGTCTAAGGACATTGATATTGGCCTATCGCAAACTTGATGAAGAAGAATACAAGGAGTTTAATGAAAGATTTTCAGAGGCCAAGAATTCGGTTAGTGCAGATCGGGAAACACTGATTGATGAAGTATCGGATAAGGTTGAGAGGAATCTCATCCTTCTTGGTGCCACTGCTGTAGAGGATAAGCTCCAAAATGGGGTTCCTGATTGCATTGATAAACTTGCCCGGGCAGGAATCAAGATTTGGGTTTTGACTGGGGATAAAATGGAGACAGCCATCAATATTGGTTTACTTAGACAAGGAATGAAGCAGATTATAGTTCATCTGGATAATCCAGATATTCAAGCATTGGAAAAGGCTGGGGATAAGATTGCTATTGCCAAGGCATCAAGGGAAAGTGTTCACCGTCAGATATCTGAAGGTATTGCACAGCTTAATGCATCCAGAGTTACCTCTCAGCAGGCATTTGCTCTGATCATTGATGGAAAATCACTTACTTATGCACTAGAGGATGATATGAAGCACATATTTCTGGAGCTCGCACTTAATTGTGCATCAGTTATCTGCTGTCGCTCATCACCAAAGCAGAAGGCACTCGTTACTAGACTTGTTAAATCTGGAACTGGCAAAACAACATTAGCTATTGGCGATGGAGCTAATGATGTAGGAATGCTTCAAGAAGCAGATATAGGTATTGGAATCAGCGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGCGATGTTGCAATTGCTCAATTCCGATATTTGGAACGGTTACTCCTTGTACACGGACATTGGTGTTACCGGAGGATCTCATCAATGATATGTTATTTCTTCTACAAGAATGTCACATTTGGATTCACTCTGTTCCTGTATGAGGTGTATGCATCATTCTCTGGACAACCCGCATACAATGATTGGTTTTTGGCTTTGTATAATGTCTTATTCTCGTCTCTTCCTGTTATTGCCCTTGGGGTTTTTGACCAGGATGTGTCAGCCCGGTACTGTCTTAAGTTTCCCATGTTATATCAAGAAGGAGTACAGAATGTCCTATTCAGCTGGCGCCGTATACTTAGCTGGATGCTGAATGGATTTATAAGTGCCATAATAATTTTCTTCTTCTGCACAAAAGCAATGGAGCTTCAGGCCTTTGATAAGGAGGGAAGAACAGCCGGGAGGGATATACTCGGAGCAACGATGTATACTTGCATTGTATGGGTCGTAAACTTGCAGATGGCACTTGGCATACGTTACTTCACCTTGATACAACATATTTTCATCTGGGGCACCATTGCTTTCTGGTATATTTTCCTCATGATATATGGAGCAATACCTTCAAGATTATCCCAGAATGCTTACAAAGTCTTCATTGAAACTCTCGCTCCATCTCCCATGTATTGGTTTGTGACATTCTTCGTGGTGATCTCAACGCTTATACCATACTTCTCCTACTCAGCAATTCAGATGAGATTCTTTCCCATGTACCATGAAATGATACAATGGTTAAGGTATGAGGGCAAGACAAATGATCCTGAATATTGTAATTTGGTGCGACAAAGATCGTTGCGGCCAACAACTGTCGGTTCAACAGCTCGCTTGGCAGCTAAGAAGGCTAACCACACAAAAAATTGA 3567 0.4023 MRGGKRRKLRLSKIYSFACGKRSFEEDHSQIGGRGYSRVVFCNEPDSLEAGIRNYADNSVRSTKYTLATFLPKSLFEQFRRVANFFFLVTGILAFTPLAPYTAVSAIVPLIIVIGATMVKEGIEDLRRKKQDIEVNNRRVKVHKHNGAFEYTEWKNLRVGDIVKVQKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLRDDLNFSDFKATIKCEDPNANLYSFVGSMEFEEQQYPLSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSKVEKKMDRIIYFLFCILFLLASVGSIFFGISTKDDLENGKMKRWYLRPDDSTIFFDPKRAPAAAIFHCLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDIYMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMDRKSGSPLIHEQDIGSDDIRDSSVAKAPIKGFNFIDERIMDGNWVNEPHADVIQKFFRLLATCHTAIPEVDEDTGNISYEAESPDEAAFVIAGRELGFEFYKRTQTSLSMYELDPVSGKKVERTYKLLSVLEFNSSRKRMSVIVKDEEGKIFLFCKGADSVMFDRLAKNGREFEEKTLEHVQEYADAGLRTLILAYRKLDEEEYKEFNERFSEAKNSVSADRETLIDEVSDKVERNLILLGATAVEDKLQNGVPDCIDKLARAGIKIWVLTGDKMETAINIGLLRQGMKQIIVHLDNPDIQALEKAGDKIAIAKASRESVHRQISEGIAQLNASRVTSQQAFALIIDGKSLTYALEDDMKHIFLELALNCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTLFLYEVYASFSGQPAYNDWFLALYNVLFSSLPVIALGVFDQDVSARYCLKFPMLYQEGVQNVLFSWRRILSWMLNGFISAIIIFFFCTKAMELQAFDKEGRTAGRDILGATMYTCIVWVVNLQMALGIRYFTLIQHIFIWGTIAFWYIFLMIYGAIPSRLSQNAYKVFIETLAPSPMYWFVTFFVVISTLIPYFSYSAIQMRFFPMYHEMIQWLRYEGKTNDPEYCNLVRQRSLRPTTVGSTARLAAKKANHTKN 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2852 1188 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1184 - -
Sto6g2852 1188 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 832 942 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto6g2852 1188 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Sto6g2852 1188 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Sto6g2852 1188 CDD P-type_ATPase_APLT_Dnf-like 57 1009 - -
Sto6g2852 1188 SUPERFAMILY HAD-like 412 904 IPR036412 -
Sto6g2852 1188 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1145 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Sto6g2852 1188 Pfam Phospholipid-translocating P-type ATPase C-terminal 888 1138 IPR032630 -
Sto6g2852 1188 Pfam Cation transport ATPase (P-type) 539 624 - -
Sto6g2852 1188 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1138 IPR023298 -
Sto6g2852 1188 Gene3D - 117 286 - -
Sto6g2852 1188 Coils Coil 123 143 - -
Sto6g2852 1188 SFLD Haloacid Dehalogenase 408 911 - -
Sto6g2852 1188 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1184 - -
Sto6g2852 1188 Gene3D - 545 699 IPR023299 GO:0000166
Sto6g2852 1188 Gene3D - 700 900 IPR023214 -
Sto6g2852 1188 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 700 IPR023299 GO:0000166
Sto6g2852 1188 SFLD p-type atpase 408 911 IPR044492 -
Sto6g2852 1188 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Sto6g2852 1188 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Sto6g2852 1188 PRINTS P-type cation-transporting ATPase superfamily signature 860 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2852 Sto-Chr6 35792979 35799442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2852 1 1182 Primary Pumps ATPases AT1G68710 75.144 0.0 1932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2852 6 35792979 35799442 Sto6g2852 6 35792979 35799442 ECH