Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2818 ATGCAGCGCCAGAAAATGGAGTTCCGAGACTACATCGAAGCGTTAGAACAAGAGCGGCTAAAGATTCAGGTCTTCTCCAAAGAGCTTCCGCTTTCGTTGGAGCTCGTCACGCAAGCCATTGAAGCTTGTAAGCAGCAATTGTCAGGGACGACGACGGAGTATAACTTTCACGGCCAATCGGAGTGCTCGGAGCAGACTACGTCGATGGAAGAAGGTCCTGTGTTGGAGGAGTTTATTCCTATTAAGAAACGAGCTTCTCCTGAATCCTGCAACGACGTCATCGAAGACGACGAAGAGCAATCTTCGCATATGCCTAAAATTCTCAAGGAAAATCATAGTAATAACGATAATAACAAGAATTCCGATAAGAGAAAATCAGATTGGCTCAGATCTGTTCAGTTATGGAATCCAGAACCCTCGCCTAAAGAGGATGTGCCGAGAAAAGCGTCGGTAGTGGAAGTGAAGAGGAATGGAGGAGCGTTCCAGCCATTCCACAGAGAGGAAAGCGCTGGAAAGACTAACAACAACAATGCATCATCGGCCTGTAAATCGCCGGTGCCGGCGACGAGCTCCACCGCCGGAGCGGTGGCCGGAGGAGGAGTTTCCGTCGCCGAGAAGAAATCGGAAGAGAAAGACGCACAGGGTCAGAGGAAGCAACGGCGGTGCTGGTCGCCGGAGTTGCACAAACGCTTCTTACAGGCGCTTCAACAGCTAGGCGGTGCAGATTCTGCAACGCCAAAGCAGATCAGAGAGCTTATGAAAGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTGCAGAAATTCAGGTTGCACACAAGAAGACCTAGCCCAATTATGCACAACAATGCTAATCCACAAACAGCTCCATTTGTACTTGTGGGCAACATTTTTGTTCAGCCACCAGAGTATGCAGCAGCATCCGGGGAGGTTACTACGGTGACTGCGCCGGGTGGGATTTATGCGCCGGTGGCAGCGCATCCTCCGGCGGCTCCGTTCGCGAAGAAATCGTCGGTTCATCTTGAGTTGAAGCAGTTAGAGCAGAATGAGCAGCATCATTCTCattcagaagaagaagaaagggtgAATCACAGTAGTGAAGGAGCTGTTCATTCAAATTCTCCTGCTGCTTCATCATCTTCCACTCACACAACATCAACTTCTGGTTATTGA 1176 0.4855 MQRQKMEFRDYIEALEQERLKIQVFSKELPLSLELVTQAIEACKQQLSGTTTEYNFHGQSECSEQTTSMEEGPVLEEFIPIKKRASPESCNDVIEDDEEQSSHMPKILKENHSNNDNNKNSDKRKSDWLRSVQLWNPEPSPKEDVPRKASVVEVKRNGGAFQPFHREESAGKTNNNNASSACKSPVPATSSTAGAVAGGGVSVAEKKSEEKDAQGQRKQRRCWSPELHKRFLQALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRPSPIMHNNANPQTAPFVLVGNIFVQPPEYAAASGEVTTVTAPGGIYAPVAAHPPAAPFAKKSSVHLELKQLEQNEQHHSHSEEEERVNHSSEGAVHSNSPAASSSSTHTTSTSGY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2818 391 MobiDBLite consensus disorder prediction 368 391 - -
Sto6g2818 391 MobiDBLite consensus disorder prediction 95 126 - -
Sto6g2818 391 Pfam Myb-like DNA-binding domain 220 269 IPR001005 -
Sto6g2818 391 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 218 273 IPR006447 GO:0003677
Sto6g2818 391 MobiDBLite consensus disorder prediction 204 221 - -
Sto6g2818 391 MobiDBLite consensus disorder prediction 348 367 - -
Sto6g2818 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 215 275 IPR017930 -
Sto6g2818 391 MobiDBLite consensus disorder prediction 158 221 - -
Sto6g2818 391 SUPERFAMILY Homeodomain-like 216 276 IPR009057 -
Sto6g2818 391 MobiDBLite consensus disorder prediction 348 391 - -
Sto6g2818 391 Gene3D - 217 275 - -
Sto6g2818 391 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 388 IPR044787 GO:0003700|GO:0006355
Sto6g2818 391 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 388 - -
Sto6g2818 391 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2818 Sto-Chr6 35401056 35403055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2818 10 327 G2-like Transcription Factor Family AT1G68670 50.299 4.91e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto6g2818 Myb_DNA-binding 3.4e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2818 6 35401056 35403055 Sto6g2818 6 35401056 35403055 ECH