Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2804 ATGGCCTCCGATGCACATGGTTCCCGCCGCAAGCACCGGCGCTCATCTTCTCCCGAAGAGGTCGAGAAATCCTCGAAGCGCCACAAGCACCGCCATCATAGCCACCGGCATCATCGGCACCGCCATGGTAGCAAGAGACGCGAAGAAGAATTGGAGCTCGATGCTGAAACTGTCGATAAGGTTCCTTCTCCAGTGATTGCTCCTAATTTCGGTCCGAATTCTCGAGGGCCCGATGACGACGTGGAGGAGGGAGAGATTCTTGAAGAGGACGGTGTTGGCGGCCAGGGTGGTGAGATTGCGAAAAAGCAGATGGAGTCTGATGCCGAGTCTGGTGAAATTATAGCCGCGGGAGAGCGAGGTATTCGATCTGATAAGGCAAATCTGGTACCTCCTAGGGAAGAGGCTTTGTTGCAGCATGAAGATGCTGTTTCCTTTAGAGAGACTGTAGGGATCAATGCTAAAAGTTCAATAACTAATAATGAGGGCATTAGCAATGGTAAATTCAGGAGTCCAGCATTGGATGGAGAAGGTGAGACATGCCATCAGAGACAATCTAGTTATAGTATACATGACGGTGATGGTTCTCCCACTCATTCAAGAGCTGAACCTCCGGATGGAAAGTTTGCTAGAGCTAATACAGATGGTTTGGGCAATGGGTATTCGGATTATAAATCTTCCAAAGGGGATGAATGGCAGCATAGGGAATTTGAAAGTTTTAAAGGAAATGAGATGCTAAAGGGTGAATATGATAATGAAGATTTGGAGGTTAATGGTGGCAAAGTAAATATTCATAAGAAGAATTCCTCCTCTGAAAGTGGAGGAGGCAAATATAGGACCTCGGGATGTTCACCCAATTATAGATATAGGAGTCCATCCAGATCAAGTGGTCATACTCACAGTATAATAGAAGAATATGCACATTCCAAGGGACGGAACCTTGATGAACATGGGGCAGTTTCATATGCTGGAAGACAGAAGACTGACTACAGCCTTGATGAGGAAAGGATGATGGAACGTGGCAGGGAGCGAAGGCATGCCAGTAGAGATTTGGTGGTAGATGATCGGAGGGAACGCAGTTCCAGTATTTACAGTCGGGAGGCCTATGATAGAGATAGGAGCAGGGATATGGATGTAAGAAGAGAAAAGGAGCGAGAAAGGGGTAGGAACAGGGAGGCTGACCATGGGCATAGGAGGGAAAAAGAACGAGAAAGAAGCCATGAGAGGGATAGGAGGGAAAAAGAACGAGAAAGAAGCCATGAGAGGGATAGGAGAGAAAAAGAACGAGAAAGAAGCCATGAGAGGGATAGGAGGGATGTTGTAAAGGATAGAAGCAGGGGAAGGGAAGTGGATAGGGATAGAAGAAGGGAAAAGGAACGGGATAGGAGCTGGGATACAGTGGTTGAGCGGAGTAGAAGGGAGAAGGAAAGAGAAAGGAGCAGGGACAGAGCAAGGGGTGGAGAGAGAGATAGACCCCGGGAGAGTGAAAGGAATGATAAAAATCGGGAAAGAGATAAAATTAGGGAGAGGGAGAGGCGAGATGATAGAAATAGGCATAAGGACCGAGACACTCTTGATAGAGATAAGCATCTAGGTTATGAGGATGGTGATGACAGCCGGGATAGATATAGATACTCTAGGCACTCAAGACATGAAGACTTGGATAATCAACGGGAGGGAAAAAGAAATTCTGAGCCGGTGAAGGTTGATAACTCAATGGAAACTTCCTTGGAAGGGGGTTATAATCTAGaaagAGGTGATGATCAACAAGATGACTTAGATGAGAAGGTTACATTGCAATTTGATGAACAAGAAGAGGAAGATCTCAATAGAATTAAGGAGGAGAGTAGAAGGAGAAGAGAAGCAATCTTAGAGAAATATAAGAAGCAGCAGCAGCATCTTCAAGCAGAAAAATCTcctgaaaatgaagaaaaagACAAGGATCCTGTGGATATTCCTGCTGCTGTTTCTGAAGCTCCTGATGCAAAAAATGATGGTGTTGATGCTTCTGATGCGGAACCGTCCTTTTCCGTTGGTAAATCTCCTCCCCAAAATGGCAATGCTGCTTCTGAGAAGATCCCTGCTGTTTCTCGTGGCTTGGGAGAGGGTAGTCCAAAGAGTGAGGGATCGGATGACCAGTTTTGTGATGATATATTTGGTGAGACGCCAACCGGAGTTAGGAAATCAGGCAAAGGAGATGGTTTACGGCTTGAGAGGGGTGGGTTGTATGACAATTGGGATGATGCAGAAGGCATTTCCAGAGAATCTGTTCAGGCACCTTGTCAATGTGATGTTGAAGGCTATCGATTTGGTGAAATACTTGATGGACGATATGAAGTTACTGCGGCACATGGTAGAGGTGTCTTTTCAACAGTTGTCCGGGCAAAGAATCTTAGGGCTGGCAACGGTGAGCCGGAAGAAGTAGCTATAAAAATTATTCGTAACAACGATACTATGTACAAGGCTGGTTTGGATGAGTTGGTCATATTAAAGAAATTAGTAGGTGCAGATCCTGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTTACAGCTGTGAGAGCATATGCAAAACAACTTTTTATTGCATTGAAGCATCTTCGGAACTGTGGTGTTCTCCATTGTGATATAAAGCCAGATAATATGTTGGTGAATGAGGCTAAAAATGTGTTGAAGCTTTGTGACTTCGGTAATGCAATGTTTGCGGGAAAGAATGAAGTTACACCATACCTTGTTAGTCGCTTTTATCGTGCCCCTGAGATAATACTTGGTTTGCCATATGATCATCCATTAGACATGTGGTCTGTAGGCTGTTGTTTGTATGAACTGTATACTGGAAAAGTTCTTTTTCCAGATCAAACTTTGAGCATTAGTATTTTTGGTGAGACAAACTTGGGAGCATTTATTGAACAGCATTTTGACCAGGACTTGAATTTTCTTGCTACTGAAGAGGATCCAGTAACGAAAAAGACTATAAAGCGGATGATTGTCAACATAAAGCCAAAGGATATTGGATCAGTCATCACTGGCTCTCCTGGAGAGGATCCAAAGATGTTAGCCAACTTCAAAGATCTTCTGGAAAAGGTTTTTGTCCTTGATCCAGACAAGAGTTGCTTGCATCTTATCCATGGTCTGGCCATTCTGGAGGCATTTCCACTGGAGGTGTTTGGCTGTATTCTTGAAGCGAATTCTTATCTCATTGGgtACAGTACATTTGGTCCTGCTGTTTTTTCTAGAATAGTCAAGAAATTGACAAATATTGCGATGCATTTTGTGAGCATTGTTGAGACagctaataaaatgttaaaatag 3408 0.4346 MASDAHGSRRKHRRSSSPEEVEKSSKRHKHRHHSHRHHRHRHGSKRREEELELDAETVDKVPSPVIAPNFGPNSRGPDDDVEEGEILEEDGVGGQGGEIAKKQMESDAESGEIIAAGERGIRSDKANLVPPREEALLQHEDAVSFRETVGINAKSSITNNEGISNGKFRSPALDGEGETCHQRQSSYSIHDGDGSPTHSRAEPPDGKFARANTDGLGNGYSDYKSSKGDEWQHREFESFKGNEMLKGEYDNEDLEVNGGKVNIHKKNSSSESGGGKYRTSGCSPNYRYRSPSRSSGHTHSIIEEYAHSKGRNLDEHGAVSYAGRQKTDYSLDEERMMERGRERRHASRDLVVDDRRERSSSIYSREAYDRDRSRDMDVRREKERERGRNREADHGHRREKERERSHERDRREKERERSHERDRREKERERSHERDRRDVVKDRSRGREVDRDRRREKERDRSWDTVVERSRREKERERSRDRARGGERDRPRESERNDKNRERDKIRERERRDDRNRHKDRDTLDRDKHLGYEDGDDSRDRYRYSRHSRHEDLDNQREGKRNSEPVKVDNSMETSLEGGYNLERGDDQQDDLDEKVTLQFDEQEEEDLNRIKEESRRRREAILEKYKKQQQHLQAEKSPENEEKDKDPVDIPAAVSEAPDAKNDGVDASDAEPSFSVGKSPPQNGNAASEKIPAVSRGLGEGSPKSEGSDDQFCDDIFGETPTGVRKSGKGDGLRLERGGLYDNWDDAEGISRESVQAPCQCDVEGYRFGEILDGRYEVTAAHGRGVFSTVVRAKNLRAGNGEPEEVAIKIIRNNDTMYKAGLDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDMWSVGCCLYELYTGKVLFPDQTLSISIFGETNLGAFIEQHFDQDLNFLATEEDPVTKKTIKRMIVNIKPKDIGSVITGSPGEDPKMLANFKDLLEKVFVLDPDKSCLHLIHGLAILEAFPLEVFGCILEANSYLIGYSTFGPAVFSRIVKKLTNIAMHFVSIVETANKMLK 1135
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2804 1135 MobiDBLite consensus disorder prediction 676 690 - -
Sto6g2804 1135 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 441 1068 - -
Sto6g2804 1135 MobiDBLite consensus disorder prediction 156 231 - -
Sto6g2804 1135 Coils Coil 492 512 - -
Sto6g2804 1135 MobiDBLite consensus disorder prediction 1 110 - -
Sto6g2804 1135 MobiDBLite consensus disorder prediction 262 299 - -
Sto6g2804 1135 Pfam Protein kinase domain 779 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2804 1135 MobiDBLite consensus disorder prediction 327 567 - -
Sto6g2804 1135 Gene3D Transferase(Phosphotransferase) domain 1 837 1070 - -
Sto6g2804 1135 CDD STKc_PRP4 776 1068 IPR044092 GO:0004674|GO:0006468|GO:0045292
Sto6g2804 1135 Gene3D Phosphorylase Kinase; domain 1 735 836 - -
Sto6g2804 1135 SUPERFAMILY Protein kinase-like (PK-like) 767 1067 IPR011009 -
Sto6g2804 1135 SMART serkin_6 777 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2804 1135 ProSiteProfiles Protein kinase domain profile. 777 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2804 1135 Coils Coil 598 632 - -
Sto6g2804 1135 MobiDBLite consensus disorder prediction 26 44 - -
Sto6g2804 1135 Coils Coil 396 430 - -
Sto6g2804 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 904 916 IPR008271 GO:0004672|GO:0006468
Sto6g2804 1135 MobiDBLite consensus disorder prediction 300 314 - -
Sto6g2804 1135 PANTHER DUAL SPECIFICITY PROTEIN KINASE 441 1068 - -
Sto6g2804 1135 MobiDBLite consensus disorder prediction 179 193 - -
Sto6g2804 1135 MobiDBLite consensus disorder prediction 256 691 - -
Sto6g2804 1135 MobiDBLite consensus disorder prediction 583 651 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto6g2804 Sto-Chr6 35257207 35266486 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2804 773 1068 MAP Kinase Gene Family AT2G18170 31.013 5.48e-22 97.4
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Sto6g2804 Pkinase 8.7e-41 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2804 6 35257207 35266486 Sto6g2804 6 35257207 35266486 ECH