Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2791 ATGCCTCCAATATTAATCAAGTCCCTCAAACTTGGCTTCCAAAACTTTCTGAACAACAACAtcctcactctcactctcaccaTCCTCTttctcatcatcttcatctacaCCCTCTACTGCCTCGCGTCCAACCCACGCGCCGTCTTCCTGGTCGACTTCGCCTGCTTCAAGCCTCCGGCCGTGTGCCGCGTCCCCTCCGCGGCCTTCGAGGAACACACCGCACTCATCTCCGGCGCCGGCGCCAACCCCGCCAACGTGGACTTCCAAATGAAGGTCCTCCAACGTTCCGGCTTGGGTGAAGAGACATGTTTACCCCCAGCCTTTCTCTATATTCCCCCTGACACCACCCTCCAAGCCTCCCGAGCCGAAGCCGAGATGGTCATTTTCTCGGCCATCGACTCGTTGCTCGAGAAAACGGGACTCAAACCCAAAGACATCGATATTTTGATAGTGAATTGTAGCCTCTTCTCGCCGACTCCGTCTTTATCGGCGATGGTGGTAAATAAGTACAAATTGAGGAGTAACATTAAGAGTTTCAATTTATCGGGGATGGGTTGTAGCGCGGGGTTGATATCGGTTGATTTAGCGCGAGATCTCCTTGAGGTGCATCCGAACTCAAACGCCGTGGTTGTGAGTACGGAGATTATTACGCCCAATCATTATGGGGGGAATGTGAAGGGGATGCTTTTGGCGAACTGTGCGTTCCGAATGGGTGGGGCGGCTATGTTGTTGTCGAACCGGTGGTCGGAGAGGGGTCGAGCCAAGTACAGGTTGGTGCATGTGGTTCGGACTCATATGGCGGCTAATGATAAAGCGTATAGGTGTTTGTTTCAAGAGGAGGATTATGAAGGGAAGGTGGGAATTTCAATCTCAAGGGACCTTGTGGCTAAAGCAGGTGAAGCTTTAAAATCCAACATCACAACCCTAGGGCCTCTAGTTCTTCCACTTTCAGAGAagcttcttgtcctcttcacaCTCATTGCaaccaaattcttcaactccaAAAGGAAGCCCTACATTCCTGACTTCAAAAAAGCCTTCCACCACTTCATCATCCACGTCGGAGGCAGCCCCATCATCGACGGAATGCAGAAGAATCTTCAGCTTTCCGACGAAGACGTCGAGCCGCCGAGGATGACTCTACATCGGTTCGGCAAtacgtcgtcgtcgtcgttaTGGTACCAATTTGACTACATTGAGTCGAAAGGGAGGATGAAGAAAGGGAACAAAGTGTGgcaattagggtttgggagtgGGTTTAAGTGTGTGAGTGCTATTTGGAAGTGTAATAGAAGCATTGACACACCTATGGATGGTTCTTGGGCTGATTGTATTCATAGGTATCCTGTTAAGttgaatcaacaagataaaggaaaagggaaagatGGAGAGAAGGTTGATTTGTGGCTGGATGGTATATGA 1422 0.4501 MPPILIKSLKLGFQNFLNNNILTLTLTILFLIIFIYTLYCLASNPRAVFLVDFACFKPPAVCRVPSAAFEEHTALISGAGANPANVDFQMKVLQRSGLGEETCLPPAFLYIPPDTTLQASRAEAEMVIFSAIDSLLEKTGLKPKDIDILIVNCSLFSPTPSLSAMVVNKYKLRSNIKSFNLSGMGCSAGLISVDLARDLLEVHPNSNAVVVSTEIITPNHYGGNVKGMLLANCAFRMGGAAMLLSNRWSERGRAKYRLVHVVRTHMAANDKAYRCLFQEEDYEGKVGISISRDLVAKAGEALKSNITTLGPLVLPLSEKLLVLFTLIATKFFNSKRKPYIPDFKKAFHHFIIHVGGSPIIDGMQKNLQLSDEDVEPPRMTLHRFGNTSSSSLWYQFDYIESKGRMKKGNKVWQLGFGSGFKCVSAIWKCNRSIDTPMDGSWADCIHRYPVKLNQQDKGKGKDGEKVDLWLDGI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2791 473 SUPERFAMILY Thiolase-like 259 429 IPR016039 GO:0016746
Sto6g2791 473 SUPERFAMILY Thiolase-like 36 253 IPR016039 GO:0016746
Sto6g2791 473 PANTHER 3-KETOACYL-COA SYNTHASE 5 454 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto6g2791 473 PIRSF Very_long_ch_3-ktacl-CoA_syn 5 463 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto6g2791 473 Pfam FAE1/Type III polyketide synthase-like protein 42 330 IPR013601 GO:0006633|GO:0016020|GO:0016747
Sto6g2791 473 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 347 428 IPR013747 -
Sto6g2791 473 PANTHER 3-KETOACYL-COA SYNTHASE 5-RELATED 5 454 - -
Sto6g2791 473 Gene3D - 105 428 IPR016039 GO:0016746
Sto6g2791 473 CDD CHS_like 47 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2791 Sto-Chr6 35102706 35105015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2791 4 450 Miscellaneous Gene Families AT1G25450 65.487 0.0 628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2791 6 35102706 35105015 Sto6g2791 6 35102706 35105015 ECH