Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2781 ATGGACGCCGGGTTCCACCGCTGCCGCCGGAAAGACAAGGTCGTCGTCATAATGGGCGGCACCGGCGCCGGGAAATCCCGCCTCTCCATCGACCTCGCCCACCATTTCTCCCTCGAAATCATCAACTCCGACAAAATGCAAGTCTACCGAGGGCTCGACATTACCACCAACAAGATCCCCTTCCACGAGCGAAACGGCGTCGTCCACCACCTCCTCGGGGATATCGACCCGGAGAACGGCGAGTTCACGCCGGCGGATTTCCGCTCCCGCGCCGCCGCCATCATCGCCGACATTGCCTCCAGGAGCAAGGTTCCCGTCGTCGTCGGCGGGTCGAACTCCTTCGTCCACGCCCTGCTCGCCGGCGAGTTCGACCCGGAGGTGAATGTGTTCGACGCGCCGCCGTCTTCGGGGAGTTTGATCTCGTCGGAGTTGAGGTACGATTGTTGCTTCCTGTGGGTGGACGTTTCGTTCTCTGTGTTATCTGATTACTTGACGAAGCGAGTCGACGATATGCTCGACTCGGGAATGGTGGACGAGTTGGCCGAGTTTTTCAACCCCGACTCGGACGATTTGGAAGCCGGTTCATCGGACCGGACCGGGTTGAGGAAAGCCATCGGCGTGCCGGAGTTCGACCGGTATTTCATGAAATACCCACCGCCAGTGCGTTGTTCGGATCCGGTACGGAAGGGTGCATACGAAGAAGCAGTGAGGGCGATTAAGGAGAACACGTGTCAGCTCGTGGAGCGACAGATAGGGAAGATCTCGCGGCTAAGAGAGGCGGGGTGGGACCTACGGAGGCTGGACGCGACGGAGACGTTCCGGGCGGCGCTCGTGGCGGGGGGAGGCGGCGGAGAGAGGTGGTCGGAGATTTGGGAGAGGGAGGTGGTGGAGCCAAGCGTGAAGATTGTGAAGAGACGTTCAGAATCAGAGCtgcaaggaaaaagagagagagagaagagaagagaggtcTCTGCttgtaaagaaaaagaaagtatcTTTGGGAAAAAAGGGGGCAAATAG 1020 0.5667 MDAGFHRCRRKDKVVVIMGGTGAGKSRLSIDLAHHFSLEIINSDKMQVYRGLDITTNKIPFHERNGVVHHLLGDIDPENGEFTPADFRSRAAAIIADIASRSKVPVVVGGSNSFVHALLAGEFDPEVNVFDAPPSSGSLISSELRYDCCFLWVDVSFSVLSDYLTKRVDDMLDSGMVDELAEFFNPDSDDLEAGSSDRTGLRKAIGVPEFDRYFMKYPPPVRCSDPVRKGAYEEAVRAIKENTCQLVERQIGKISRLREAGWDLRRLDATETFRAALVAGGGGGERWSEIWEREVVEPSVKIVKRRSESELQGKREREKRREVSACKEKESIFGKKGGK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2781 339 Gene3D - 11 305 IPR027417 -
Sto6g2781 339 Pfam IPP transferase 144 251 - -
Sto6g2781 339 Pfam IPP transferase 47 126 - -
Sto6g2781 339 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 305 IPR039657 -
Sto6g2781 339 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 157 264 - -
Sto6g2781 339 MobiDBLite consensus disorder prediction 307 339 - -
Sto6g2781 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 187 IPR027417 -
Sto6g2781 339 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 9 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2781 Sto-Chr6 34944167 34945370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2781 17 316 C2H2 Transcription Factor Family AT2G27760 29.723 1.50e-41 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2781 6 34944167 34945370 Sto6g2781 6 34944167 34945370 ECH