Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2772 ATGCCGGTTAAGGATGGAAACTCCGATAAGGATAAGTGCTTGGAGCTCTTTTTGAAAATCGGTTTGGATGAGCGCACGGCTCGGAATACCATTGCTAACAATAAAGTTACAGCCAATCTTACTGCTGTCATTGATGAGGCCGGTGTTACTGATGGATGCAGTCGAACTATAGGAAATCTTCTGTACACGGTTGCTACAAAGTATCCAGCAAATGCCTTACCACATCGCCCAACGTTGCTGCAATACGTTGTTTTGTCAAAGATAAAGACAACAGCGCAGTTAGATGCAGCACTATCCTTTCTAGCTACTACAGGCTTGGAGACTCTTGATTTGAAAAAGTTTGAAGAAGCTTGTGGTGTTGGTGTTGAGGTTCCAATagaaaaaatcaaacaaacTGTAAATGAAGTTTTTGAGGAGCATAAGGCTAAAATTATGGAACTACGCTATCGAACAAATGTGGGTGAGTTACTGGGACATATGCGGAAGAGACAACCATGGGCTGATGCAAAAGTTGTCAAGCAACTTGTTGATGCAAAATTATCTGAGCTACTTGGTGAAAGGACAGCAGCAGATGATGAAAAGCCTtcgaaaaagaagaaagagaagcctCCTAAAGTAGATAAGGCAGCATCGGTTTCTACTCCAGAAAGTCCACCTGAAGAGGACCTGAATCCATATATGATATTCCCTAGTCCAGAGGAAAATTTCAAGGTGCATACTGAAGTACTTTTTAGTAATGGTAGTATTCTGAGGTGTAGCAATACAAAGGAGCTTCTTGACAGGCACTTAAAAGCAGCAGGTGGGAGTGTTTTGACCCGCTTTCCACCTGAACCAAATGGATACCTACATATTGGTCATGCCAAGGTCTGTAATATGTTTCATAACATGATAGACTTCTTTATTGCTCAGGCAATGTTTATTGATTTTGGACTGGCAAAAGATAGAGGTGGAGGTTGCTACTTGAGGTTTGATGATACTAATCCTGAagcagaaaagaaagaatatattGATCACATTGAAGAAATTATCCAGTGGATGGGATGGGAACCATTCAAGATTACTTACACCAGTGATTACTTCCAAGAACTATATGAGTTAGCAGTAGAACTGATAAGAAGGGGCCATGCATATGTTGATCATCAGACACCTGATGAGATAAAGGAGTATAGGGAGAAGAAAATGAACAGTCCTTGGAGGGACAGACCAATTTCAGAATCATTGAAACTCTTTGAGGATATGAGACGGGGTCTTATTGAAGAAGGAAAAGCAACACTTAGAATGAAGCAAGACATGCAGAGTGATAATTATAATATGTATGACCTTATTGCATACCGTATCAAGTTTACTCCTCATCCCCATGCTGGAGACAGGTGGTGTATCTATCCCAGTTATGATTTTGCTCACTGCATTGTGGATTCACTAGAGAATGTCACACATTCATTGTGTACGCTTGAATTTGAGACACGTCGTGCATCATACTATTGGTTGTTGCATGCCTTGGGCCTTTACCAACCTTATGTATGGGAGTATTCAAGGTTGAATGTCTCAAACACAGTCATGTCCAAGCGCAAACTAAATCGTCTAGTAACGGAGAAGTGGGTTGATGGCTGGGATGATCCTCGTCTGATGACACTAGCAGGTTTGCGTCGCAGAGGTGTGACTCCAACTGCAATCAATGCTTTTGTTCGGGGAGTTGGAATCACCAGAAGCGATGGCACTTTGATATCTGTGGAACGCCTTGAGTATCATGTTAGAGAAGAACTGAACAGAGAAGCTCCTCGTACAATGGTTGTCCTACATCCACTTAAGgtTGTAATTACTAACCTGGAAGCCAGCTCAAAAATAGAGGTTGATGCAAAGAAATGGCCTGATGCTAAAGCTGATGATGCATCTGCTTTTTACAAGGTTCCTTTTTCCAATGTTGTATATATTGAACATTCCGATTTTCGTATGCAAGATTCAAAAGATTATTATGGCCTTGCTCCTGGTAAATCCGTGATACTCAGATATGCATTTCCCATAAAGTGTACTGAAGTTGTCCTAGCTGATGATAATAAGACTATTCTTGAAATCCGGGCTGAGTATGATCCTTCAAAGACGACAAAACCAAAGggcGTTCTTCATTGGGTTGCTCAACCTTCCCCTGGAGCTGATCCAGTTAAGTTGGAAGTCAGGTTATTTGACAAGCTATTCTTATCAGAGAATCCTGCTGAACTCGACAACTGGCTTGGCGACCTAAACCCACAGTCCAAAGTGGTGATTCCTAATGCATATGGTGTGCCCTCACTCCAGGATGCGACAGTTGGGGATAGGTTCCAATTTGAAAGATTAGGCTACTTTGTGGTGGACCAGGACTCGACTCctgaaaaacttgttttcaatcgGACTGTCACCTTAAGAGACAGTTATACTAAAGGtggaaaataa 2427 0.4034 MPVKDGNSDKDKCLELFLKIGLDERTARNTIANNKVTANLTAVIDEAGVTDGCSRTIGNLLYTVATKYPANALPHRPTLLQYVVLSKIKTTAQLDAALSFLATTGLETLDLKKFEEACGVGVEVPIEKIKQTVNEVFEEHKAKIMELRYRTNVGELLGHMRKRQPWADAKVVKQLVDAKLSELLGERTAADDEKPSKKKKEKPPKVDKAASVSTPESPPEEDLNPYMIFPSPEENFKVHTEVLFSNGSILRCSNTKELLDRHLKAAGGSVLTRFPPEPNGYLHIGHAKVCNMFHNMIDFFIAQAMFIDFGLAKDRGGGCYLRFDDTNPEAEKKEYIDHIEEIIQWMGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPDEIKEYREKKMNSPWRDRPISESLKLFEDMRRGLIEEGKATLRMKQDMQSDNYNMYDLIAYRIKFTPHPHAGDRWCIYPSYDFAHCIVDSLENVTHSLCTLEFETRRASYYWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNRLVTEKWVDGWDDPRLMTLAGLRRRGVTPTAINAFVRGVGITRSDGTLISVERLEYHVREELNREAPRTMVVLHPLKVVITNLEASSKIEVDAKKWPDAKADDASAFYKVPFSNVVYIEHSDFRMQDSKDYYGLAPGKSVILRYAFPIKCTEVVLADDNKTILEIRAEYDPSKTTKPKGVLHWVAQPSPGADPVKLEVRLFDKLFLSENPAELDNWLGDLNPQSKVVIPNAYGVPSLQDATVGDRFQFERLGYFVVDQDSTPEKLVFNRTVTLRDSYTKGGK 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2772 808 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 276 287 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Sto6g2772 808 Pfam tRNA synthetases class I (E and Q), catalytic domain 270 589 IPR020058 GO:0004812|GO:0005524|GO:0043039
Sto6g2772 808 CDD GlnRS_core 270 594 - -
Sto6g2772 808 Pfam tRNA synthetases class I (E and Q), anti-codon binding domain 592 783 IPR020059 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Sto6g2772 808 Gene3D Ribosomal Protein L25; Chain P 596 715 IPR020056 -
Sto6g2772 808 PANTHER GLUTAMINE-TRNA LIGASE 12 807 - -
Sto6g2772 808 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2 172 247 IPR007638 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
Sto6g2772 808 MobiDBLite consensus disorder prediction 187 223 - -
Sto6g2772 808 Pfam Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 12 169 IPR007639 GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418
Sto6g2772 808 Gene3D Ribosomal Protein L25; Chain P 716 801 IPR020056 -
Sto6g2772 808 Gene3D HUPs 241 595 IPR014729 -
Sto6g2772 808 PANTHER OS05G0182800 PROTEIN 12 807 - -
Sto6g2772 808 Gene3D - 123 192 IPR042559 -
Sto6g2772 808 Gene3D - 7 122 IPR042558 -
Sto6g2772 808 SUPERFAMILY Nucleotidylyl transferase 270 598 - -
Sto6g2772 808 MobiDBLite consensus disorder prediction 187 207 - -
Sto6g2772 808 SUPERFAMILY Ribosomal protein L25-like 592 802 IPR011035 GO:0006412
Sto6g2772 808 TIGRFAM glnS: glutamine--tRNA ligase 270 805 IPR004514 GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2772 Sto-Chr6 34839205 34851892 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2772 6 34839205 34851892 Sto6g2772 6 34839205 34851892 ECH