Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2765 ATGGGATCCAAACTGGAAGGACCGTCTGCCCCGGCAATTCGACGAGACCTATATGAGGTGTTATCTGTGTCAAGGGATGCAAATGATCATGAGATAAAAACTGCTTACAGAAAGCTCGCTCTCAATGGTCTTGAGACAATTCTCTGCAGCTATGTAGCCAATGTTACTGATATTGGTAACAGGTATCACCCTGACAAGAATGGCAGCAATCCTGAAGCTTCAGAACTTTTTAAAGAGGTTGCATTTTCTTACAGTGTCTTGTCTGACCCAGAGAAGAGAAGGCAATATGACAGTGCTGGATTTCAGGCACTTGAAGCTGATAGCATGGACATGGAAGTTGACTTATCCAATCTAGGAACTGTCAACACAATGTTCGCTGCTTTGTTCAGCAAACTGGGTGTCCCTATCAAGACCACCATTTCAGCTAATGTTCTTGAAGAAGCTTTGAATGGCACGGTTACAATCAGACCCcttccaattggaacatcaattAGTGGGAAGGTAGAAAAGCAATGTGCTCATTTTTTTGGTGTAACAATAAATGAGCAGCATGCTCAGTCGGGGGTTGTAGTAAGAGTTACTTCAACTGCACAAAGCAAATTTAAGTTGCTCTACTTTGAACATGATGCAAATGGTGGCTATGGTTTGGCCTTGCAGCGGTTAGAATCTGGGAAAAACTCTACAGAAAACCTGGAAAACAGAGTACACTATTTAGAGAAAGAGATGGTTGGAGTGAAGGAATACATAGGAATCCTCGAGGAATGCATGAGGGAACTACATGATGCTCTGATTAGGTTAAGCAAAGAAAAAGAGGAAGAGAGTGAGAAGACTGGAAGGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGCGAATGCTTTGGCAATGGCCAAGGAACCTGAAGCTGCCTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGCGAAGTCTCAGAACTAAAGCCTGGCACTCATATATTTGCAGTCTATGGAGATAACTTCTTTAAGACTGCTAGTTATACAATTGAAGCACTTTGTGCAAAAACATACGAGGATACTACCCAAAAACTAAAGGACGTTGAGGcccaaattttaacaaaaagaaaCGAGCTACGCCAATTTGAAACAGAATACAGAAAGGCGCTGGCACGCTATCAAGAAGTGACTGAAAGATACACCCAAGAAAAACAGACAGTTGACGAGCTTCTGAAGCAAAGAGATGGCATCCATTCATCCTTCACTGTTTCCAAGCCAACCAATATTAGTGGGAACGCTAGTAATTTGAGTAATGGAAGTAGTAGTGGCAAGTTTGCTGGTGAAGATTCCAAATCAGAGAGCCCTGGGGAAGATGGAAGCTCAGATGGAAAGGATAAATCAGGCAGAAAGAAATGGTTTAATCTCAATCTTAATAGTTCTGGTTCCAGTCTTCCATGGTTGTAA 1461 0.41 MGSKLEGPSAPAIRRDLYEVLSVSRDANDHEIKTAYRKLALNGLETILCSYVANVTDIGNRYHPDKNGSNPEASELFKEVAFSYSVLSDPEKRRQYDSAGFQALEADSMDMEVDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTIRPLPIGTSISGKVEKQCAHFFGVTINEQHAQSGVVVRVTSTAQSKFKLLYFEHDANGGYGLALQRLESGKNSTENLENRVHYLEKEMVGVKEYIGILEECMRELHDALIRLSKEKEEESEKTGRVTSAGMYFLHFQVYRMDSTANALAMAKEPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEALCAKTYEDTTQKLKDVEAQILTKRNELRQFETEYRKALARYQEVTERYTQEKQTVDELLKQRDGIHSSFTVSKPTNISGNASNLSNGSSSGKFAGEDSKSESPGEDGSSDGKDKSGRKKWFNLNLNSSGSSLPWL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2765 486 Coils Coil 252 276 - -
Sto6g2765 486 ProSitePatterns Nt-dnaJ domain signature. 77 96 IPR018253 -
Sto6g2765 486 ProSiteProfiles dnaJ domain profile. 16 100 IPR001623 -
Sto6g2765 486 MobiDBLite consensus disorder prediction 420 447 - -
Sto6g2765 486 SMART dnaj_3 15 92 IPR001623 -
Sto6g2765 486 MobiDBLite consensus disorder prediction 449 470 - -
Sto6g2765 486 MobiDBLite consensus disorder prediction 471 486 - -
Sto6g2765 486 CDD DnaJ 16 89 IPR001623 -
Sto6g2765 486 Gene3D DnaJ domain 12 136 IPR036869 -
Sto6g2765 486 PRINTS DnaJ domain signature 18 36 IPR001623 -
Sto6g2765 486 PRINTS DnaJ domain signature 55 70 IPR001623 -
Sto6g2765 486 PRINTS DnaJ domain signature 72 92 IPR001623 -
Sto6g2765 486 PRINTS DnaJ domain signature 92 111 IPR001623 -
Sto6g2765 486 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 271 479 - -
Sto6g2765 486 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 2 220 - -
Sto6g2765 486 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 271 479 - -
Sto6g2765 486 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 2 220 - -
Sto6g2765 486 Pfam DnaJ domain 61 97 IPR001623 -
Sto6g2765 486 SUPERFAMILY Chaperone J-domain 15 104 IPR036869 -
Sto6g2765 486 Coils Coil 221 241 - -
Sto6g2765 486 MobiDBLite consensus disorder prediction 420 486 - -
Sto6g2765 486 Coils Coil 357 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2765 Sto-Chr6 34747513 34755511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2765 9 107 C2H2 Transcription Factor Family AT1G74250 35.577 2.24e-08 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2765 6 34747513 34755511 Sto6g2765 6 34747513 34755511 ECH