Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2764 ATGGGCATGAGCATGAGCGAGCGAAGCTCACGTGATGGAGCCGGACCTTTCCTGAAAGCAAACGCCCTCTTTCTACACAGTCTCCCTCGTTCTTCGCCTTCTCTCTCTAGAATCTTCCCTTCCTTTTGGGAGCTTGGGCGTTTGCTTTCGGGAAAGGTCCGGCTCCATCACGTGAGCTTCGCTCGCTCATGCTCATGCCCATGCCCTCTTTCTATGCGGAGTCTCCTATTGCCCTCTTTCATGGTCTTCCCCTTGGTTATTGAGAAGTTTTCATTTGAAGAGCAGGCATCATTGGTGTGGCAATTTCTTTGTAGCTTACCAGTTAAAATGATGTCAGAATTTCTTCCCTGGCTTGCTTTGTATATATCATCTGATGAACATAAGGATATGCTAAGGTGCTTGTGCTCAATAATTCCCGAGGAGAAGCTTCTTCAACAGGTGGTTTTTGGATGGATGGAAGGGGTAAAGATTAAATGTAGAAGCTGCACAAATGATACCCAGGTTCATTTACAGAGTGCTGGGACATGTGACTTAGCCTGTCATTCTGAAAAGGTGTATTGTGCATGTGAACATTCTAAAACTGGAAAAAGGAAATGGATGGAGCTAAGCTTTAAACCACCAAGTTCTGCTGTGTCATGCCCTATAGATGAAATATTACTTTGGCATAAGTCTATAAAACAAGAGTTGATTGATTTAGCTGAGGCTGCTAGGAATATACAACTTTCTGGGAAATTTTCTGATCTGTCTGCATTTAATTTGAGGCTGCAGTTTATTACTGAAGTCTGCATCTTTCATAGCATTGCTGAGGACAAAGTTATATTCCCTGCTATAGATGCAGagctttctttttttcatgaGCATGCAGATGAAGAACTTCAGTTTGACAAGCTTAGGTGCCTGATAGAAGGTATTCAAAGTGCTGGAGCCAACTCATCATCTACTGAATATTACATGCAGTTGAGGTCTCACGCTGAACAAATCATGGATACCTTACTTAATCACTTTGAAAATGAGGAAGCTCAGGTTCTACCGCTTGCACGGAAACTTTTTAGCCCTCAGAGACAACGGGAATTACTTTATGAAAGTTTGTGCTTAATGCCTTTGAAATTGATTGAGTCTGTAATACCATGGCTGGTAGGATTTCTTAgtgaagaagaagcaaaggcaTTTCTTTGGAATATGTATATGGCAGCCCCACCAACAGATTACGCATTAATTACACTTTTTTCTGGTTGGGCATGCAAAAGAAATTCCAGGAACAATGGTTTCTCTTCAAGTATAACAGGTTTCTGTCCTGCCAGGAGACTTTTGGGGACAGAAATCACTAGCCCATCATTCTGCCCTGATAAAAATTCTTCATCCATTCAACAAGATGATGCAATTGGAAGTAGTGGTCCAGTCAAGCATGGAAATCCAGAATCAAGGGAAGAGAATAATCTTTCTCCCTTCACTGGAACTATAGACTCTCTTAACTTACCGGTTAGTCAGTCTTGTTGTGTCCCTGGATTAGGGGTAAATGCAAGTCATCTAGGAGTGAGTTCTTTAGTCCCTACAAAATCTCTTCGGTCCTTGTCTGGTTGCTGCTCTGCGCCTTCTCTCAACTCTAGTCTTTTTGTCTGGGAGACAGATGTAGTCTCTGCTGATGATGGGTTTAAAACACGGCCTATTGataacatatttaaatttcataaagCCATTGGTAAAGATTTGGAGTATATAGATGTTGAATCTGTAAAATTAAATGATTGTGATGAAACTTTCCTGAGGCAGTTCACTGGCAGATTTCGCTTATTGTGGGGTTTGTACAGAGCTCACAGCAATGCAGAGGATGATATAGTATTTCCAGCATTAGAATCAAAAGAAACTCTTCACAATGTGAGCCACTCCTACACTTTAGACCATAAGCAGGAAGAAAAGTTATTTGAAGATATTTCATCTGGACTCCTTGAGCTTACTCAATTACATGAATCCTTGAATAGTAAGAACTCTTCTGACCATTTAACCAGCTGCTATTCTGATTATTCTggttgctctgataccatgctAAAGTACACTGAGCTAGTTACAAAGATTCAAAGCATGTGTAAATCTATCAGAGTGACACTAGATCACCATATTTTCAGGGAAGAACTTGAATTATGGCCACTGTTTGATAGACATTTTTCTGTGGAAGAACAGGATAAAATTGTTGGTCGTATCATTGGTACTACTGGGGCAGAGGTTCTCCAATCAATGCTTCCGTGGGTAACTTCTGCTCTCACACAAGAGGAGCAAAACAAAATGATGGACACATGGAAGCAAGCTACCAAAAACACCATGTTCAGCGAGTGGCTCAATGAATGGTGGGAAGGACCTGCttcaatttcaaataaaattacaacTAGTGACTGTGTTTCACTAGgtgCTGATGCCAATGAAAGTTTAGATCATAACTTTCAAGCTTTCAAGCCAGGGTGGAAAGATATATTCAGGATGAACCAGAATGAATTAGAATCAGAAATTAGAAAAGTTTCACGAGATTCAACTCTTGatccaagaagaaaatcatATCTTATTCAAAATCTAATGACTAGTCGCTGGATAGCTTCTCAGCAGAAGTCATCTCAAACAACAGCTGGTGAATTTCCAAATGGAGAAAGTTTACTTGAAAGGTCACCTTCTTTTCATGATCCAGAAAAAAAAGTCTTTGGTTGTGAGCATTACAGAAGAAATTGTAAACTCCTGGCTGCTTGCTGTGGAAAGCTATTCTCCTGCAGGTTCTGCCATGACAAAGTCAGTGACCATTCAATGGATAGGAAGGCTACAATTGAGATGATGTGCATGCGCTGCCTGCAATTGCAGCCAGTTGGGCCAGTATGTGCAACACCTTCTTGTGGTGGTCTGTCAATGGCAAAGTACTACTGTAGTATTTGCAAATTTTTTGATGATGAAAGGACAGTTTATCATTGCCCTTTCTGCAATATATGCCGGCTGGGGAAGGGACTCGGTGTAGATTCTTTCCACTGCATGCAGTGCAATTGTTGCCTGTCAATGAAATTAGTTGACCACCATTGCCAGGAAAAAGGCTTAGAAACAAACTGCCCCATCTGCTGTGACTTTTTGTTCACATCCAGTATATCTGTTAGAGCTCTTCCCTGTGGCCATTTCATGCATTCCACTTGCTTTCAGgcATATACGTGTGGTCACTACACCTGTCCAATTTGTCGCAAATCATTGGGAGATATGGCGGTTTATTTTGGTATGCTTGATGCTCTATTGGCTTCTGAGGAACTCCCAGAAGAATATCGGAATCGCCGTCAGGATATACTGTGCAATGACTGCGATAAGAAGGGCAATGCAGCATTCCATTGGCTCTACCATAAATGTGGGTTTTGCAGATCTTATAATACCAgagttatttaa 3402 0.3989 MGMSMSERSSRDGAGPFLKANALFLHSLPRSSPSLSRIFPSFWELGRLLSGKVRLHHVSFARSCSCPCPLSMRSLLLPSFMVFPLVIEKFSFEEQASLVWQFLCSLPVKMMSEFLPWLALYISSDEHKDMLRCLCSIIPEEKLLQQVVFGWMEGVKIKCRSCTNDTQVHLQSAGTCDLACHSEKVYCACEHSKTGKRKWMELSFKPPSSAVSCPIDEILLWHKSIKQELIDLAEAARNIQLSGKFSDLSAFNLRLQFITEVCIFHSIAEDKVIFPAIDAELSFFHEHADEELQFDKLRCLIEGIQSAGANSSSTEYYMQLRSHAEQIMDTLLNHFENEEAQVLPLARKLFSPQRQRELLYESLCLMPLKLIESVIPWLVGFLSEEEAKAFLWNMYMAAPPTDYALITLFSGWACKRNSRNNGFSSSITGFCPARRLLGTEITSPSFCPDKNSSSIQQDDAIGSSGPVKHGNPESREENNLSPFTGTIDSLNLPVSQSCCVPGLGVNASHLGVSSLVPTKSLRSLSGCCSAPSLNSSLFVWETDVVSADDGFKTRPIDNIFKFHKAIGKDLEYIDVESVKLNDCDETFLRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISSGLLELTQLHESLNSKNSSDHLTSCYSDYSGCSDTMLKYTELVTKIQSMCKSIRVTLDHHIFREELELWPLFDRHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKNTMFSEWLNEWWEGPASISNKITTSDCVSLGADANESLDHNFQAFKPGWKDIFRMNQNELESEIRKVSRDSTLDPRRKSYLIQNLMTSRWIASQQKSSQTTAGEFPNGESLLERSPSFHDPEKKVFGCEHYRRNCKLLAACCGKLFSCRFCHDKVSDHSMDRKATIEMMCMRCLQLQPVGPVCATPSCGGLSMAKYYCSICKFFDDERTVYHCPFCNICRLGKGLGVDSFHCMQCNCCLSMKLVDHHCQEKGLETNCPICCDFLFTSSISVRALPCGHFMHSTCFQAYTCGHYTCPICRKSLGDMAVYFGMLDALLASEELPEEYRNRRQDILCNDCDKKGNAAFHWLYHKCGFCRSYNTRVI 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2764 1133 ProSiteProfiles Zinc finger CHY-type profile. 891 960 IPR008913 GO:0008270
Sto6g2764 1133 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1021 1071 IPR013083 -
Sto6g2764 1133 Gene3D nmb1532 protein domain like 551 780 - -
Sto6g2764 1133 MobiDBLite consensus disorder prediction 447 461 - -
Sto6g2764 1133 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 82 1133 - -
Sto6g2764 1133 Pfam Hemerythrin HHE cation binding domain 214 346 IPR012312 -
Sto6g2764 1133 CDD Hr-like 216 344 - -
Sto6g2764 1133 Gene3D - 1097 1133 - -
Sto6g2764 1133 ProSiteProfiles Zinc finger RING-type profile. 1027 1069 IPR001841 -
Sto6g2764 1133 SUPERFAMILY CHY zinc finger-like 890 954 IPR037274 GO:0008270
Sto6g2764 1133 SUPERFAMILY RING/U-box 1026 1073 - -
Sto6g2764 1133 SMART ring_2 1027 1068 IPR001841 -
Sto6g2764 1133 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1-LIKE 82 1133 - -
Sto6g2764 1133 Gene3D nmb1532 protein domain like 216 361 - -
Sto6g2764 1133 CDD RING-H2_Pirh2 1026 1069 - -
Sto6g2764 1133 Pfam Zinc-ribbon 1074 1131 IPR039512 -
Sto6g2764 1133 MobiDBLite consensus disorder prediction 447 482 - -
Sto6g2764 1133 CDD Hr-like 559 715 - -
Sto6g2764 1133 Pfam Ring finger domain 1026 1069 IPR001841 -
Sto6g2764 1133 Pfam CHY zinc finger 898 973 IPR008913 GO:0008270
Sto6g2764 1133 ProSiteProfiles Zinc finger CTCHY-type profile. 963 1026 IPR017921 -
Sto6g2764 1133 SUPERFAMILY Zinc hairpin stack 964 1018 IPR037275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2764 Sto-Chr6 34738201 34744253 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2764 547 787 C2H2 Transcription Factor Family AT3G18290 25.311 2.09e-19 92.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2764 6 34738201 34744253 Sto6g2764 6 34738201 34744253 ECH