Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2759 ATGGCGTTCAAAGCCATTTCAGACACATCAAACAAGCTCACAAATTGGAACTCCAGTACCGACCCATGTACTTCTTCTTGGACCGGCGTCTCTTGCCTCCACAACCGCGTCTCTCGCCTCGTCCTCGAAAACCTCGATCTCCGAGGCTCATTCCATCCCTTAACTTCCCTAACCCAGCTTCGCCTCCTCAGCCTCAAGCGAAACCGCCTCTCCGGCCCCATTCCCAATCTCTCCAACCTCACAGCTCTCAAGCTTCTCTTCCTCTCCTACAAtgacttctccggcgagtttccgccCGCGGTCACTTCCCTCTTCAAGCTCTACCGCCTCGATCTGTCCCACAACAACctctccggcgagattccggcgacgGTCAACCACTTGGCCCACGTTCTCACTCTCCGCCTCGACGGGAACCGATTCTCCGGCGATATCCCCAGTCTGAACCTCCCTAACCTCCGAGAGTTCAACGTCTCCGGGAATGGACTCTCCGGCGAGATACCCGAATCGCTGTCGGGTTTCCCCGAATCGTGCTTCGCTCAAAACCCGTTTCTCTGCGGAGCCCCGATGAAGAAATGTACGGAGGTTGAGTCCGAACCCAGCAAACCCGGATCTGAAGGAGCCATAGCGTCGCCGTTAACGCCGCCTCACAACCAAAACAACCTAACAATCATATCATCATCACCTAGTTCAATCCCGGGGAACGATTCGACCCCACCGAGTCGAACCAAGCCCAACTCGTCTCCCAAAATAACCCCAATCGCACTAATCGCCATCATACTCGGCGACATCGCGGTCCTCGCCGTGGTCTCCCTCCTCCTCTACTGCTACTTCTGGCGCAACTTCTCCGCGAGGCTCAAACAGGGGAAGGGAGCATCCTCATCATCGTCATCGAAGATTCTAGAAACCGAGAAGATCGTGTACTCGTCGAGTCCCTACCCGGCGCAATCGAGCTTGGAGAGGGGTCGAATGGTGTTCTTGGAGGGGGAGAGGAGGTTCGAATTGGAGGATCTCCTTCGAGCTTCGGCGGAGATGTTGGGGAAAGGGGGGTTCGGGACGGCGTACAAGGCGGTGCTGGACGACGGGAGTGTGGTGGCGGTGAAGAGGTTGAAGGACGCGCAGATTGGAGGGAAGAAGGAGTTCGAGCAGCATATGGAGGTTCTGGGGAAGATGAGGCATCCCAATGTGGTGACGTTGAGGGCTTATTATTTTGctagagaagagaaattgcttGTTTCTGATTTCATGCCCAATGGAAGCTTGTTCTGGCTCCTTCATGGAAACCGAGGACCTGGACGGACCCCACTGGATTGGACCACAAGGCTCAAAATAGCAGCTGGAGCGGCACGTGGCGTGGCCTTTATTCACGCCTCGTGCAAGTCCCTTAAGCTCACCCACGGTAACATCAAATCCACCAACATCCTCCTCGACAAGACAGGAAACGCACGCGTGGCGGATTTTGGGCTCTCCATCTTCGCCGGCCCAACAACCTCCGCCACCCCTCGATCCAACGGCTACCGCGCTCCCGAAGTGCTGGACGGTCGGAGATGCACTCACAAGTCCGACGTGTACTCCTTCGGCGTCGTCCTCCTGGAGATCCTCACCGGGAAGTGCCCCTCCGCCGTGGACGGAGGCGGCGGGAGCGGGGCGGTGGAGCTGCCGCGGTGGGTGCAGTCGGTGgtgagggaggagtggacggcgGAGGTGTTCGATCTGGAGCTGATGAGGTATAAGGATATTGAGGATGAGATGGTGGGGTTGCTTCAGATTGGCCTGTCTTGTACCGCGGTTGCACCTGATCAACGGCCCAGCATGAGCCACGTGGTGAAGATGATCGAGGAGATCCGTGGGGTCGACGTGGCGTCACCTTGTGGTGACACGTTGGATTCTGTGTCGGATTCGCCTTCCGTGTCTGAAGATGCTGCTCCCTCTTGA 1935 0.5442 MAFKAISDTSNKLTNWNSSTDPCTSSWTGVSCLHNRVSRLVLENLDLRGSFHPLTSLTQLRLLSLKRNRLSGPIPNLSNLTALKLLFLSYNDFSGEFPPAVTSLFKLYRLDLSHNNLSGEIPATVNHLAHVLTLRLDGNRFSGDIPSLNLPNLREFNVSGNGLSGEIPESLSGFPESCFAQNPFLCGAPMKKCTEVESEPSKPGSEGAIASPLTPPHNQNNLTIISSSPSSIPGNDSTPPSRTKPNSSPKITPIALIAIILGDIAVLAVVSLLLYCYFWRNFSARLKQGKGASSSSSSKILETEKIVYSSSPYPAQSSLERGRMVFLEGERRFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAQIGGKKEFEQHMEVLGKMRHPNVVTLRAYYFAREEKLLVSDFMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHASCKSLKLTHGNIKSTNILLDKTGNARVADFGLSIFAGPTTSATPRSNGYRAPEVLDGRRCTHKSDVYSFGVVLLEILTGKCPSAVDGGGGSGAVELPRWVQSVVREEWTAEVFDLELMRYKDIEDEMVGLLQIGLSCTAVAPDQRPSMSHVVKMIEEIRGVDVASPCGDTLDSVSDSPSVSEDAAPS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2759 644 ProSiteProfiles Protein kinase domain profile. 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2759 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 632 - -
Sto6g2759 644 Pfam Leucine rich repeat N-terminal domain 4 32 IPR013210 -
Sto6g2759 644 SUPERFAMILY Protein kinase-like (PK-like) 344 613 IPR011009 -
Sto6g2759 644 Gene3D Phosphorylase Kinase; domain 1 314 415 - -
Sto6g2759 644 MobiDBLite consensus disorder prediction 195 248 - -
Sto6g2759 644 MobiDBLite consensus disorder prediction 624 644 - -
Sto6g2759 644 MobiDBLite consensus disorder prediction 212 248 - -
Sto6g2759 644 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Sto6g2759 644 PANTHER - 2 632 - -
Sto6g2759 644 Gene3D Ribonuclease Inhibitor 149 194 IPR032675 -
Sto6g2759 644 CDD STKc_IRAK 346 615 - -
Sto6g2759 644 SUPERFAMILY L domain-like 6 190 - -
Sto6g2759 644 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Sto6g2759 644 Pfam Protein kinase domain 344 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2759 644 MobiDBLite consensus disorder prediction 627 644 - -
Sto6g2759 644 Gene3D Ribonuclease Inhibitor 2 148 IPR032675 -
Sto6g2759 644 Gene3D Transferase(Phosphotransferase) domain 1 416 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2759 Sto-Chr6 34694153 34697636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2759 1 642 Receptor kinase-like Gene Family AT1G68400 66.208 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto6g2759 Pkinase 2.2e-39 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2759 6 34694153 34697636 Sto6g2759 6 34694153 34697636 ECH