Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2758 ATGTACCTTTCTCACAAAGAAAGGTTCTGTTTCTGTCATCAAGTCGACACTGGCCTCCCATGTAGTTGTAACACTTATCACATTCATCAGATAATCGAACTTCAAGAAACATTTGAGCAGTTAAGAATGACAATAGATATCATAGCCAGGACATGTATGGTTTATAAAATCAATGGGGGGACTGATATTGAGGCTGTGATTACATCTATACATGGTTACATTATTACATCTTGGTCAAAAACCTTAATCAAATTTTCTCGTTGCAAGACTGTGTTCCAATCTTGCGAACCCAAAACATGTGGAAATGGCCAAAACATAAGCTACCCTTTCTACATAGATGGCAAACAAGACCCCTCTTGTGGGTTCCCTCGTTTCGGCCTCACGTGTGCTCCTGATGGCTTTCCCATACTCAATCTTACCAATACCAACTTCATAGTCCAACAAATCTTCTACCACAATCACTCCCTTCGAGTCTCCGATCCCCAATTCTCGATCTCGAATGCGACCACCGAGTGTCTCTCTCGATCCCGGAACCTCACACTGTTTGGAAACAGGTATGAATTTGCTCCGAAACAGAAGGAGATCTTGTTGTTCTTCGATTGCGCGACGCCGGGGAAAGGGGAGGAGGAGTACAGAGTAGGGTGTGACAGGGGAAACAGAACAAGGTCTGTTTTGGCTATGGATGATGGGAATGAGAAGATGGGGTATGCCATGGGGAGTTGCAGAGGAGGGTTCATGAAGAGGATGGTGATGGAAGAAGAAGGTGGAGGAGGGTTTGGGAGTGGAAGAGAAGGGATTTGGGAGGCTTTGAGAAGAGGGTTTGTGTTGGTTTGGAAAGTTACAGAGTGTGAAGGGTGTGAAAAGAGTGGAGGAAGGTGTGGGTTTGATATGGATGCCTATAGCTTCATGTGCTACTGTCCTGATGGAGATTATCTTCTGAGATGTCATCCTTATGAGGAACATGGAAAGTTGAAGGTTATTGCAGCAACAGTTTCTGCAGTTGCTGTAGTAGGAGCTTTGATCATTGTGATCTACTGCTTTAGTAGGAAActaatttttcacaaaatcaCTTCTAAAGCTCATCAAGATTTTGAGGCTTTTCTCAAGCACCATGGACCACTTGCTATAAGAAGATATAGCTACTCAGAGATAAAGAAAATGACCAATTCTTTCAAGGACAAATTAGGGCAAGGAGGCTATGGAAGTGTGTTCAAAGGGACGTTACATGAGGATTGTGGTCTAGTTGCTGTGAAGGTTTTGAATGAAACAAAAGGTAATGGAGAGGAATTCATAAATGAGGTTGCAAGTATCAGTAGGACCTCTCATGTTAACATCGTCTCTCTTTTAGGATTTTGCTTTGAAGGATCCAAGAAGGCTCTTGTCTATGAATTTATGGCTAATGGATCTCTCGAGAAGttcatatacaacaacaacagcaATCAAAGCGATTTCCCTGATCTCCAATTGAGTTGTGAAATGCTATACAAAATTGCAATGGGTGTTGCACGAGGGTTAGAGTACTTGCACCGAGGATGTAATACTCGGATATTGCATTTTGACATTAAACCTCACAACATACTGTTGGACGAAAACTTTTTTCCGAAGATCTCAGACTTCGGACTGGCAAAAATATGCCCTCGAAACGAGAGCATTGTGTCGATGTTGTGTGCCAGAGGAACCATAGGATATATTGCTCCCGAGGTGATCTCGAGAAATTTTGGAGAGGTCTCCCACAAGTCAGATGTCTATAGTTTTGGAATGATGATTTTAGAAATGGTCGGAAGAAGAAGGAATGTGAACGTTGAAGTGGATCGTTCGAGCGAAATATATTTTCCACAATGGATTTACAAACGTCTAGAGTTGAACCAAGAGCTTGCACTTAAGAGCATTAGGAATGAAGGTGACAGAGAGAGGATGAGACAAATGGTGATAGTAAGCTTGTGGTGCATACAAACTAACCCTCTAGACCGTCCAATGATGAGTAAAGTGGTGGAAATGCTTGAAGGGAGAGTTGAGTCATTGCAAGTACCTCCAAAACCATACTTGTCATCTCCTCCAACATCACCATGCCCTTCCTCTTCAACTAATTGA 2091 0.4189 MYLSHKERFCFCHQVDTGLPCSCNTYHIHQIIELQETFEQLRMTIDIIARTCMVYKINGGTDIEAVITSIHGYIITSWSKTLIKFSRCKTVFQSCEPKTCGNGQNISYPFYIDGKQDPSCGFPRFGLTCAPDGFPILNLTNTNFIVQQIFYHNHSLRVSDPQFSISNATTECLSRSRNLTLFGNRYEFAPKQKEILLFFDCATPGKGEEEYRVGCDRGNRTRSVLAMDDGNEKMGYAMGSCRGGFMKRMVMEEEGGGGFGSGREGIWEALRRGFVLVWKVTECEGCEKSGGRCGFDMDAYSFMCYCPDGDYLLRCHPYEEHGKLKVIAATVSAVAVVGALIIVIYCFSRKLIFHKITSKAHQDFEAFLKHHGPLAIRRYSYSEIKKMTNSFKDKLGQGGYGSVFKGTLHEDCGLVAVKVLNETKGNGEEFINEVASISRTSHVNIVSLLGFCFEGSKKALVYEFMANGSLEKFIYNNNSNQSDFPDLQLSCEMLYKIAMGVARGLEYLHRGCNTRILHFDIKPHNILLDENFFPKISDFGLAKICPRNESIVSMLCARGTIGYIAPEVISRNFGEVSHKSDVYSFGMMILEMVGRRRNVNVEVDRSSEIYFPQWIYKRLELNQELALKSIRNEGDRERMRQMVIVSLWCIQTNPLDRPMMSKVVEMLEGRVESLQVPPKPYLSSPPTSPCPSSSTN 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2758 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Sto6g2758 696 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 2.4 89 680 - -
Sto6g2758 696 ProSiteProfiles Protein kinase domain profile. 389 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2758 696 SMART serkin_6 389 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2758 696 SUPERFAMILY Protein kinase-like (PK-like) 372 668 IPR011009 -
Sto6g2758 696 Pfam Protein tyrosine and serine/threonine kinase 391 667 IPR001245 GO:0004672|GO:0006468
Sto6g2758 696 ProSitePatterns Protein kinases ATP-binding region signature. 395 418 IPR017441 GO:0005524
Sto6g2758 696 Gene3D Phosphorylase Kinase; domain 1 364 464 - -
Sto6g2758 696 Gene3D Transferase(Phosphotransferase) domain 1 465 676 - -
Sto6g2758 696 Pfam Wall-associated receptor kinase galacturonan-binding 95 160 IPR025287 GO:0030247
Sto6g2758 696 Pfam Wall-associated receptor kinase C-terminal 257 309 IPR032872 -
Sto6g2758 696 PANTHER RUST RESISTANCE KINASE LR10-RELATED 89 680 IPR045874 GO:0004672
Sto6g2758 696 MobiDBLite consensus disorder prediction 676 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2758 Sto-Chr6 34679512 34685083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2758 95 695 Receptor kinase-like Gene Family AT1G66910 39.308 2.45e-132 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto6g2758 PK_Tyr_Ser-Thr 6.7e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2758 6 34679512 34685083 Sto6g2758 6 34679512 34685083 ECH