Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2753 ATGAAGTCATCACCCAACTTTTCCATTTCATCAGATCTTCACCTcatttttctccttcttcttcaccacTCCgtgtcttcttcttccttgaaCCCCAAGTTCAAAACCTGCGAGCCCAAATCCTGCGGAAACGGCCCAAACATAAGCTACCCTTTCTACATCGAAGGCAAACAACCCCCTTTCTGTGGATTCCCTCGCTTCCGCCTCTCATGTAATTCCCACAACGCCTTCCCAATCCTCAATCTCTCTGGAACCTTCTACACAATCCACCAAATCTTCTACAGAAACCACTCCTTTCGAGCCTCCAATCCCGCCTTCTCATCACTCCCCCACACCCACTGTCTCTCTCCCTCCATCAACAACATCACCTTCTCCGCCGGAAGATTCCAGTTCGCTCCCAACCAGAAGGAACTGCTCTTGCTCTTCGATTGCGACCTGGCCTCGCTGCCGCGAGACGTTCCGGGATACAGGATTGGGTGTTCTGCCGAGAACAACAGAACGGGGTCCGTTCTGGCCGTAGATGGGGAGGACCATCGGAATTTAAAATACGCGATGAAGTATTGTAAGGGGAAAGTAACGAGAGTGGTGGTGGGAGATGATGTGTACGAGAGAGATGGGATTGGGGAGGCGTTGAAAAGAGGGTTTGTGGTGGAGTGGAAGGAGGATGCGTGTGAAGCGTGTGAGAAGAGTGGAGGGAAGTGTGGGTATGAGTATGACAAGTATAGTTTTAGGTGCTATTGTCCTTATGGAGATGAGCTTTTGACATGTCATTCTGATAAAACTGGGAAGTTGGTGGTTGTTATTGCTGCAACAGTTTTTGCAGTTGCATTAGGAGGAGCTTTAATCATTGTAATTTATTGCCTTAGAAGGAAGATATTTTCTCATAAAACTACTAGATTCTTGAGAAACCAATCTAAAGCCCATCAAGATTTTGAGGCCTTTCTCAAGAGCCATGGACCACTTCCTATAAGAAGATATAGCTATTCAGAGATAAAGAAAATGACCAATTGTTTCAAAGAAAAATTAGGCCAAGGAGGCTTCGGATGTGTGTTCAAAGGGAAGTTAGATGAGAAATGTCTAGTTGCTGTGAAGGTTTTGAATGAAACAAAAGGTAATGGAGAGGAATTCATCAATGAGGTGGCAAGTATCAGTAGGACTTCTCATGTTAACATCGTCACTCTTTTAGGATTTTGCTTCGAAGGATCAACCAAGAAGGCCCTTGTCTACGAATTTATGGCTAATGGATCTCTCGAGAAGTTCATATACAGCAGCAacgacaacaaacaaagccttttccccgATCACCAATTGAGTTGtgaaatattatacaaaattgcGGTGGGTGTTGCACGAGGGTTAGAGTACTTGCACAGAGGATGTAATACTCGTATACTGCATTTTGACATCAAGCCTCACAACATACTCTTGGACCAAAACTTCTTTCCAAAGATCTCGGATTTCGGACTAGCTAAAATATGCCCTAGAGATGAGAGCATCGTGTCGATGTTCGGCACGAGAGGAACCATAGGGTATATTGCTCCGGAGGTGATTTCTAGAAATTTCGGAGAGGTGTCTCACAAGTCAGATGTTTATAGTTTTGGAATGATGGTTCTGGAAATGGTTGGGGGAAGAAAGAACGTGAACGTTGAAGTGGATTGTACGAGCGAAATATATTTTCCACATTGGATTTACAAGCGTCTAGAATTGAACCAAGAGCTTGCATTGCAGAGCATTAGGAATGAAGGTGACAAAGAGGGGATTAGACAGATGGTGATAGTAAGCTTGTGGTGCATACAAACTGACCCTTCAGACCGTCCAATGATGAGTAAAGTGGTGGAAATGCTTGAAGGAAGAGTTGGGACCTTGCAATTACCACCAAAGCCTTACTTGTCATCTCCTTCAAGATCACCATGTTCTTCCTCAACTCAATGA 1932 0.4255 MKSSPNFSISSDLHLIFLLLLHHSVSSSSLNPKFKTCEPKSCGNGPNISYPFYIEGKQPPFCGFPRFRLSCNSHNAFPILNLSGTFYTIHQIFYRNHSFRASNPAFSSLPHTHCLSPSINNITFSAGRFQFAPNQKELLLLFDCDLASLPRDVPGYRIGCSAENNRTGSVLAVDGEDHRNLKYAMKYCKGKVTRVVVGDDVYERDGIGEALKRGFVVEWKEDACEACEKSGGKCGYEYDKYSFRCYCPYGDELLTCHSDKTGKLVVVIAATVFAVALGGALIIVIYCLRRKIFSHKTTRFLRNQSKAHQDFEAFLKSHGPLPIRRYSYSEIKKMTNCFKEKLGQGGFGCVFKGKLDEKCLVAVKVLNETKGNGEEFINEVASISRTSHVNIVTLLGFCFEGSTKKALVYEFMANGSLEKFIYSSNDNKQSLFPDHQLSCEILYKIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDQNFFPKISDFGLAKICPRDESIVSMFGTRGTIGYIAPEVISRNFGEVSHKSDVYSFGMMVLEMVGGRKNVNVEVDCTSEIYFPHWIYKRLELNQELALQSIRNEGDKEGIRQMVIVSLWCIQTDPSDRPMMSKVVEMLEGRVGTLQLPPKPYLSSPSRSPCSSSTQ 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2753 643 Pfam Wall-associated receptor kinase galacturonan-binding 37 101 IPR025287 GO:0030247
Sto6g2753 643 MobiDBLite consensus disorder prediction 624 643 - -
Sto6g2753 643 SMART serkin_6 336 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2753 643 Pfam Wall-associated receptor kinase C-terminal 170 248 IPR032872 -
Sto6g2753 643 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 2.4 24 628 - -
Sto6g2753 643 Gene3D Phosphorylase Kinase; domain 1 312 411 - -
Sto6g2753 643 MobiDBLite consensus disorder prediction 627 643 - -
Sto6g2753 643 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Sto6g2753 643 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 628 IPR045874 GO:0004672
Sto6g2753 643 Gene3D Transferase(Phosphotransferase) domain 1 412 621 - -
Sto6g2753 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Sto6g2753 643 SUPERFAMILY Protein kinase-like (PK-like) 317 616 IPR011009 -
Sto6g2753 643 ProSiteProfiles Protein kinase domain profile. 336 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2753 643 Pfam Protein tyrosine and serine/threonine kinase 338 615 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2753 Sto-Chr6 34640197 34644170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2753 6 642 Receptor kinase-like Gene Family AT1G66910 38.978 2.03e-129 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto6g2753 PK_Tyr_Ser-Thr 1.7e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2753 6 34640197 34644170 Sto6g2753 6 34640197 34644170 ECH