Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2740 ATGGTTCTAGTTTCTGAGtttcgttttttctttttttcttaccttgtctttcttctctctgctGTGTATGCAAATGGGAAGAATGATCATTGTCCAAGGTCCTTTCCTTGTGGAAAACTTGGTAAAATTCAATTTCCTCTCACCAAGGCAGAAAGGCCAGACTGTGGCTTATTGGTAGTACATGGTTGTGATGAACCAAATCCATCTTCACTTAAAACAATTCAACTGGAGAAGAATGGAAGACAACTCTTGCTTACCACAGTCTTCCAACGAGAAAATTTGATTAAGGTTTTTGACCAAGATCTACACAATCATTTGAAGTCTAATGtatgtcaagttttcaacaaAAATATCAGTCTTCCTCAACACTCTCCTTTGGTTTCTTTTCACTTACGTAATAACGTAACCATCTACAGATGTAATCACAGCCTCAATATCAGTCCCCCCATTGGTTTTATAAACCATACATGTCCTGGCTATGATATCTATTATCAAGGTTCAGACCTTCCTCTTACTTCCCagacccaaaagaaaaaaaataaaggcctTCCTCTTAATCTTGAACAAGCCCCAATTTTCTCAGCATGTTCAGTTCTTCAGCTTCTAGAAAAAGACGTCACTAATACCACCAACCTATTGTCATTCTTAACTGCTCAAATGCTTCTTGAAGTTCGATTATCAGATGAATGTGATAAGTGTTACAACCACAACAGAGGCCAATGTCGActtgacaaaaacaaaaagttttTTTGTGACAAAGGGTTATCTATTGGACTTTTAGGCATTCTTATAATCTGGTTACTACTTAGAGAGCATTACAAAAGAAATTATGCATCTTCAAACGTCCAATTGCAATCAAAAAACAACAAGGCAATAGATCCCTACTCAAATATAGATCCAGAAAGTAGCGGAGCCTACTTTGGGGTACCCCTCTTCACTATTGAGGAGCTTGAGGAAGCAACAAATAATTTTGACCGTTCTAGAGAACTAGGAAATGGAGGCTTTGGCACTGTGTACTATGGAAAACTCCAAGATGGTCGAGAAGTAGCAGTCAAGCGCCTGTATGAACACAACTGCAGACGATTAGAACAATTCATGAATGAAATAGTGATCCTTACTCGTTTGTGCCATCAGAACCTTGTGTCCCTATATGGCTGCACTTCACGCCACAGCCATAAACTCCTCCTTGTGTACGAGTACATTAGAAATGGCACCCTTTCATGTCATCTCCATGGTGAACTTGCCCATCGTTGTTTACTACCATGGCAAATAAGAATCAAAATTGCCATAGAAACTGCAACTGCATTAGCTTATCTTCATGCCTCTGACACCATCCACCGCGATGTCAAAACAAACAACATTCTTATAGACAACAACTTCTGTGTTAAGGTAGCAGATTTTGGGCTTTCAAGGTTGTTCCCCAATGATGTCACCCATGTTTCCACTGCTCCACAAGGGAGCCCAGGTTATGTTGACCCAGAATATCATCAATGCTACCAGCTTACTAGCAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTATTGAGCTGATATCATCTAAGGCTGCAGTTGATATGAATAGGCATAAGGATGAGATAAACTTGGCAAATCTAGCCATAAAAAAGATCCAGGATAGTGCACTTGGGGACTTGGTGGATCCTTCACTTGGTTTTGAATCAGACAATGAAGTTAGGAGGATGATAGTTTCAGTGGCTGAACTGGCTTTTCGGTGCTTACAAAGGGATAAGGAATTGAGACCTTCCATGGATGAGGTTTTGATGATATTGAAGAGAATAGAGAGTGGGAAGGAGAAGGTTGAGCATCTAGAGGAAGTGGATATTCATGGGGCAGGGATATCACTCAGCGGTCCTATACATCCACCGTCACCGGATTGCAATGAGACTGGATCGttgaaaaatacaaaatcaCCACCTTCTGCAGAAACCATGACTCATAAATGGAGTAGTGAGTTAACTACACCCAATGCCAGTACTTAA 1998 0.3839 MVLVSEFRFFFFSYLVFLLSAVYANGKNDHCPRSFPCGKLGKIQFPLTKAERPDCGLLVVHGCDEPNPSSLKTIQLEKNGRQLLLTTVFQRENLIKVFDQDLHNHLKSNVCQVFNKNISLPQHSPLVSFHLRNNVTIYRCNHSLNISPPIGFINHTCPGYDIYYQGSDLPLTSQTQKKKNKGLPLNLEQAPIFSACSVLQLLEKDVTNTTNLLSFLTAQMLLEVRLSDECDKCYNHNRGQCRLDKNKKFFCDKGLSIGLLGILIIWLLLREHYKRNYASSNVQLQSKNNKAIDPYSNIDPESSGAYFGVPLFTIEELEEATNNFDRSRELGNGGFGTVYYGKLQDGREVAVKRLYEHNCRRLEQFMNEIVILTRLCHQNLVSLYGCTSRHSHKLLLVYEYIRNGTLSCHLHGELAHRCLLPWQIRIKIAIETATALAYLHASDTIHRDVKTNNILIDNNFCVKVADFGLSRLFPNDVTHVSTAPQGSPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSKAAVDMNRHKDEINLANLAIKKIQDSALGDLVDPSLGFESDNEVRRMIVSVAELAFRCLQRDKELRPSMDEVLMILKRIESGKEKVEHLEEVDIHGAGISLSGPIHPPSPDCNETGSLKNTKSPPSAETMTHKWSSELTTPNAST 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2740 665 ProSiteProfiles Protein kinase domain profile. 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2740 665 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 664 IPR044652 -
Sto6g2740 665 Gene3D Phosphorylase Kinase; domain 1 299 400 - -
Sto6g2740 665 MobiDBLite consensus disorder prediction 633 665 - -
Sto6g2740 665 Pfam Protein kinase domain 325 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2740 665 Gene3D Transferase(Phosphotransferase) domain 1 401 614 - -
Sto6g2740 665 MobiDBLite consensus disorder prediction 619 665 - -
Sto6g2740 665 SUPERFAMILY Protein kinase-like (PK-like) 306 597 IPR011009 -
Sto6g2740 665 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 9 664 - -
Sto6g2740 665 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Sto6g2740 665 Coils Coil 526 546 - -
Sto6g2740 665 SMART serkin_6 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2740 Sto-Chr6 34537743 34540987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2740 33 664 Receptor kinase-like Gene Family AT1G25390 46.544 2.65e-172 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto6g2740 Pkinase 1.7e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2740 6 34537743 34540987 Sto6g2740 6 34537743 34540987 ECH