Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2739 ATGGGTTCGGGTTCTTTTGTGTTTCGTTGTTTATTCTTGTTCTCTCACcttttccttcttctctctGCTGTGTGTGGAAATGGGAGCCATGATCAGTGTCCAAGGTCCTTTCATTGTGGAAATCTTGGTAGAATTCAATTTCCTTTCACCAAGGCAGAGAGGCAGGACTGTGGCTTATTGATGGTACATGGTTGCGATGATCCAAATTCATCTTCACCAAAAAAGATTCAGCTGCAAGAAAATGGAAGATTAGTGTCTCCTTTGGTGTCTTTTCACATCCGTTATAACGTAACCATATACAGATGCAATCACAGCCTCAATGTGAGGCCTCCCTTTGATTTTATGAGCCATGCATGTCCTGGCTATGATATCTATTATTCTAGCTCAAACCCTTCTCCTAATCATGAACAAGTCCAAAGCACTACTTTCTCAGAATGTTCAGTTCTTCAGCTTCCAATTAAAGACCTCACTGACACCAAAGACGTTTTGAAATTCTTAACCGGTCAAATGGTTATGGAAGTTCGATTATCTGATGATTGTGATAAGTGTTACAACCACAAGGGGGGCCAGTGTCGACTTGACAGAAACAAAAACTTTTCTTGCTACAAAGagaaaaaaagtatggcTTTGAAGCTGGCCAAGGGACTTGGGCTAGGTTTATCTATTGGAGTTTTAGGCATTCTGGTAATTTGGTTGCTACTTAAACAGCATTACAAACAAAAATATGCATCATCAAATGTCCAACTGCAATCAAGAAACAACAGTGATATAGATCCCTACTCAAATACAGACCCAGAAGGTGGCAGAGCCTACTTTGGGGTACTCCTTTTCACTTATGAGGAGCTTGAGAAAGCAACAAATAATTTGGACCGTTCTAGAGAACTAGGAAATGGAGGCTTTGGAACTGTGTACTATGGAAAACTCCAAGATGGTCGAGAAGTTGCAGTCAAGCGCCTATATGAGCACAACTACAGACGAGTAGAACAATTCATGAATGAAGTTGAGATCCTTACTCGTTTGTGCCATCAGAACCTTGTGTCCCTCTATGGCTGCACCTCGCGCCATAGCCGCGAACTTCTCCTTGTGTACGAGTACATTAGAAATGGCACACTTTCATGTCACCTCCATGGCGAACTAGCCCATCCAGGTTTACTACCATGGCGAACAAGAATCAAAATCGCCATAGAAACTGCAACTGCATTGGCTTATCTCCATGCCTCCGACACCATCCACCGCGATGTCAAAACCAACAACATTCTGCTAGACAACAACTTCTGTGTTAAGGTAGCAGATTTTGGGCTTTCAAGGTTGTTCCCCAATGATGTCACTCATGTCTCCACTGCCCCACAAGGCACACCAGGTTATGTTGACCCAGAATATCACCAATGTTACCAGCTTACCAGCAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTATTGAGCTGATATCATCTATGGCAGCAGTTGATATGGGCAGGATTAAGGATGAGATAAACTTGGCAAATCTAGCCATAAAGAAGATTCAGAAAAGTGAATTTGGGGAGCTGGTGGATCCTTCACTTGGCTTTGATTCAGACAGTGAAGTTAGGAGGATGATAGTTTCAGTGGCTGAGTTGGCTTTTCAGTGCTTACAAAGGGACAAGGAATTGAGACCTTCCATGGATGAGGTTTTGGAAATATTGAGGAGAATAGAGAGTGGGAAGGAGGACGTTGAGCATCTAGAGGAAGATGGATCACTCAGTGGTCCAATACATCCACCTTCACCGGATTGTGATGAGACAGGATTGTTGAAATATGCAAAGTCACTACCTTCACCAAAAGCTGTGATTGATAAATGGCATAGTCAATCTTCTACATCAAATTTCAGTGTTTAA 1875 0.4181 MGSGSFVFRCLFLFSHLFLLLSAVCGNGSHDQCPRSFHCGNLGRIQFPFTKAERQDCGLLMVHGCDDPNSSSPKKIQLQENGRLVSPLVSFHIRYNVTIYRCNHSLNVRPPFDFMSHACPGYDIYYSSSNPSPNHEQVQSTTFSECSVLQLPIKDLTDTKDVLKFLTGQMVMEVRLSDDCDKCYNHKGGQCRLDRNKNFSCYKEKKSMALKLAKGLGLGLSIGVLGILVIWLLLKQHYKQKYASSNVQLQSRNNSDIDPYSNTDPEGGRAYFGVLLFTYEELEKATNNLDRSRELGNGGFGTVYYGKLQDGREVAVKRLYEHNYRRVEQFMNEVEILTRLCHQNLVSLYGCTSRHSRELLLVYEYIRNGTLSCHLHGELAHPGLLPWRTRIKIAIETATALAYLHASDTIHRDVKTNNILLDNNFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSMAAVDMGRIKDEINLANLAIKKIQKSEFGELVDPSLGFDSDSEVRRMIVSVAELAFQCLQRDKELRPSMDEVLEILRRIESGKEDVEHLEEDGSLSGPIHPPSPDCDETGLLKYAKSLPSPKAVIDKWHSQSSTSNFSV 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2739 624 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 85 623 IPR044652 -
Sto6g2739 624 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 81 IPR044652 -
Sto6g2739 624 Coils Coil 557 577 - -
Sto6g2739 624 ProSiteProfiles Protein kinase domain profile. 289 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2739 624 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Sto6g2739 624 Gene3D Phosphorylase Kinase; domain 1 268 365 - -
Sto6g2739 624 SUPERFAMILY Protein kinase-like (PK-like) 271 561 IPR011009 -
Sto6g2739 624 Gene3D Transferase(Phosphotransferase) domain 1 366 576 - -
Sto6g2739 624 MobiDBLite consensus disorder prediction 571 596 - -
Sto6g2739 624 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 85 623 - -
Sto6g2739 624 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 13 81 - -
Sto6g2739 624 Pfam Protein tyrosine and serine/threonine kinase 291 561 IPR001245 GO:0004672|GO:0006468
Sto6g2739 624 SMART serkin_6 289 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2739 Sto-Chr6 34527591 34535768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2739 98 624 Receptor kinase-like Gene Family AT1G25390 50.940 1.57e-168 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto6g2739 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2739 6 34527591 34535768 Sto6g2739 6 34527591 34535768 ECH