Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2737 ATGATTCAAGTTTTTGCGTTTCGTTTACTCTTTTATACTCATCTTACACTTCTTCTCTCAGCAAGTTATGGAAATGGGAGCCATGATAAGCGACCACCATCATTTAGTTGTGGAAGTCTTGGAAGAATCCACTATCCTTTCACCAAGGCAGAAGAGCCAGAGTGCGGCTTAATTGCAATACATGGTTGTGACAATTCGTCTTCAGATAAAGCTATTAAACTGGAGAATGGAAGATCATTCTTGGTTACAAGTATACTTCAGCAAGATGGTTTGAATAGCAGCCTTCAGATTACAAGTTTTGACCAAGTTCTACACGATCGTTTGCAATCCAATGGTTCTTGTGAAGCCTTCAATAATAACATTACTCTTCCTGAAAGCTCTCCTTTGGTTTCTTTTGATATCAAGTATAACATAACTCTCTATAGATGCAACCACAGCCTCAATGTTAGCCCCCCTACTGGTTTTATTAAACATCTTTGTCCTGACTACAATATCTATCATTATAGCATACTCTCTACTCCAAATCATACTGAACTAAGCTCTTTCTCAGCATGTTCTGTTCTTGTGCTTCCGAAAAAAGACCTACCCGATACCGATGATCTCCGGTCATTCTTAACCGGTCAAATAGTTCTTGATGTACGATTATCGGATGATTGTGACAAGTGTTACAACCGCAAAGGAGGTCTGTGTAGCCTTGACAGCAACAGAAGCTTTAAATGTGACAAAGCTTCAGGTCATAAATTTAAGGTTAAGCTGGCGCTGGGACTTGGGCTAGGTTTATCTATTGGACTTTTAGGCATTCTGATAATGTGGTTGCTATTTAGACGGCATTACAAACAAAAATATGCATCTTCAAATGTCCAATTgcaaacaacaaataaaaatgcaTTTGATCCCTACTTAAATGCAGAAAGTGGAAGAGCCTACTTTGATGTACCCCTCTTCTCTTACGAGGAGCTTGAGAAAGCAACAAATAATTTTGACCGTTCTAGAGAGCTTGGAACTGGAGGTTTTGGCATGGTTTACTATGGAAAACTCCAAGATGGAAGAGACGTTGCAGTGAAGCGCCTATATGACCATAACTACCGGCGACTGGAGCAGTTCATGAACGAAATTGAGATCCTCACACGCATGCGCCACAAAAACCTTGTGTCCCTCTATGGCTGCACTTCACGCCATAGCCGCGAGCTCCTCCTTGTGTACGAATACATCCCAAATGGCACCGTGTCTTGTCATCTCCACGGCGAACAAGCCTACCGTGGTCTACTACCATGGCCTATAAGAATGAAACTTGCCATTGAAACAGCAAGTGCACTGGCATACCTTCATGCTCACGACACCATCCACCGCGATGTCAAAACCAACAACATCCTCCTTGACAGCAATTTCCAAGTTAAGGTTGCAGATTTTGGTCTTTCAAGATTGTTCCCCAATGATGTCACACATGTTTCCACTGCCCCACAAGGGACACCAGGTTATGTTGACCCAGAATACCACCAATGCTACCAGCTTACCAGCAAGAGTGATGTGTATAGTTTTGGGGTTGTTCTTATTGAATTGGTATCATCCATGGAAGCAGTTGATATGAGCAGGCATAAGGATGAGATAAACTTGGCAAATCTAGCCATAAAGAAGATTCAGAACAGTGAATTTGGGGAGTTAGTGGATCCTTCACTTGGGTTTGAGTCTGATAGTAATGTGAGGAGAATGATAGTTTCTGTGGGAGAATTGGCTTTCCAGTGTTTACAGAGAGATAGGGAATTGAGGCCTTCCATGAAAGAGGTTTTGGAGATGCTGAGGAGAATTGAGAGTGGGAATGAGGAGCTTCAGAATATGGAGGAAGTGGATCTTCATGATGCTGTGGGGATATCACATTCTCACAGTGGTCCTATGCATCCATCTTCACCTCCTACACCAGATTGTGATGAGACTGGTTTGTTGAAAAGTACTAAGTCTCTGCCTTCTCCTAAAGCTGTGGCTGATAAACGGCTTAGTGATTCGACTACACCTACGGGTTGTGGCTCAGCTAGAAGTACAGTACAGAAGTCATCATCTGGCGTCTCTCCTGATTTCTTGGATTTCTTGACAAATTATCCATCTTGTAGAATCTTGACTTCTAGTAATGGCCTGATTCTTGGTCGTAGTACAAAATGTAATAATGAAATAGAGTTGTTTATTTCGAACCCGGCTACGAAATCATGGCTTCCGATTCCTACCCCAGATTATCTGAAAGAAAATCCAGATTTTGATATTAATATTGCATTCGAATGCAATAATCAAGATTCACATTCAGATGACTATATGATGTTTTGTTTCGAGGCTCCTGATGAGTGGGCTTCTTCATGCTATGGCGTGAAATTCTACTCCCCAAAAGAGGGAATTTGGAAGGGAACTGAAAAAGGCTTCTTCATTGGTGGTAGACCAATGCAATTTGACATGCATGTATATCACAAGAAAGCCTttcaatttatttcaaattgttTTCCTTCTCTTAATAAAAATAGCCCTTATTTTAGGCCTTATATAATGTCATACAATATTGAAGATGGCGAATCAAGAATGATTAGGGTTCCAAAAGAAGCAAGAAGAGGCTCTCATGACTCCAGTTGTAAAATGGGTATTTATAAATGGGGAAAAGCAAGAAATTCTGATGAATCAATTTGTTTAGTGAGATTGAGAAAGTGCGTCTTTACTGCGTGGGTTTCAGTTGACTATGAAGCAAGCAAATGGAGAAGGGTTTTGAAAATAAGAGTGAAAGCAATATTGGGAATTAAGGAAGAAGCGCCTGTAATTGTTAGAGGATTCAAAGTCATGAATGGTGATTATTTGGTTTTTACTACAAAGAAGAAGGTTTATGGCTATGGATTAGGctataaaaattatatgaagCTTCAAGAAATTTGTGAGCATCAATTTGATCATGGTGGTGATAAAGTCTGCTTCACTTCTTATTCAGACACTCTTCGTTCATGTGAGGATGGAGCTACAACTTTACCATTGACgcaacaatcatattaa 3018 0.3976 MIQVFAFRLLFYTHLTLLLSASYGNGSHDKRPPSFSCGSLGRIHYPFTKAEEPECGLIAIHGCDNSSSDKAIKLENGRSFLVTSILQQDGLNSSLQITSFDQVLHDRLQSNGSCEAFNNNITLPESSPLVSFDIKYNITLYRCNHSLNVSPPTGFIKHLCPDYNIYHYSILSTPNHTELSSFSACSVLVLPKKDLPDTDDLRSFLTGQIVLDVRLSDDCDKCYNRKGGLCSLDSNRSFKCDKASGHKFKVKLALGLGLGLSIGLLGILIMWLLFRRHYKQKYASSNVQLQTTNKNAFDPYLNAESGRAYFDVPLFSYEELEKATNNFDRSRELGTGGFGMVYYGKLQDGRDVAVKRLYDHNYRRLEQFMNEIEILTRMRHKNLVSLYGCTSRHSRELLLVYEYIPNGTVSCHLHGEQAYRGLLPWPIRMKLAIETASALAYLHAHDTIHRDVKTNNILLDSNFQVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELVSSMEAVDMSRHKDEINLANLAIKKIQNSEFGELVDPSLGFESDSNVRRMIVSVGELAFQCLQRDRELRPSMKEVLEMLRRIESGNEELQNMEEVDLHDAVGISHSHSGPMHPSSPPTPDCDETGLLKSTKSLPSPKAVADKRLSDSTTPTGCGSARSTVQKSSSGVSPDFLDFLTNYPSCRILTSSNGLILGRSTKCNNEIELFISNPATKSWLPIPTPDYLKENPDFDINIAFECNNQDSHSDDYMMFCFEAPDEWASSCYGVKFYSPKEGIWKGTEKGFFIGGRPMQFDMHVYHKKAFQFISNCFPSLNKNSPYFRPYIMSYNIEDGESRMIRVPKEARRGSHDSSCKMGIYKWGKARNSDESICLVRLRKCVFTAWVSVDYEASKWRRVLKIRVKAILGIKEEAPVIVRGFKVMNGDYLVFTTKKKVYGYGLGYKNYMKLQEICEHQFDHGGDKVCFTSYSDTLRSCEDGATTLPLTQQSY 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2737 1005 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2737 1005 SUPERFAMILY Protein kinase-like (PK-like) 309 599 IPR011009 -
Sto6g2737 1005 ProSiteProfiles Protein kinase domain profile. 327 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2737 1005 MobiDBLite consensus disorder prediction 624 686 - -
Sto6g2737 1005 Gene3D Phosphorylase Kinase; domain 1 302 403 - -
Sto6g2737 1005 MobiDBLite consensus disorder prediction 662 686 - -
Sto6g2737 1005 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Sto6g2737 1005 Coils Coil 592 615 - -
Sto6g2737 1005 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 10 675 - -
Sto6g2737 1005 Pfam Protein tyrosine and serine/threonine kinase 330 599 IPR001245 GO:0004672|GO:0006468
Sto6g2737 1005 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 675 IPR044652 -
Sto6g2737 1005 Gene3D Transferase(Phosphotransferase) domain 1 404 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2737 Sto-Chr6 34511181 34519735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2737 35 670 Receptor kinase-like Gene Family AT1G25390 47.352 1.67e-169 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto6g2737 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2737 6 34511181 34519735 Sto6g2737 6 34511181 34519735 ECH
Sto6g2737 6 34511181 34519735 Sto8g2182 8 14371932 14377624 ECH
Sto6g2737 6 34511181 34519735 Sto10g0574 10 4842466 4845533 ECH