Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2728 ATGGGGAGGGTATGGAAAGAGGTGCAAATAATAGGCCATGAAAGCTCTTCAGCCATCTATGGTGAAGACTCCTTCAAAAGACTCATTCTTGTGTTGTGGGCAACATTTGTCACACTATCTCTTCTTGCtgccatcatcttcttctgtGCCGACGCCGCAACGAAAGACTCGAACAAACCTTCCGCCGCCAACGACCACAGCTCCGCCTGCGCGGCCGCCGGGTGCGGCGGAGGCTGTGGCTCTGCTCTTCTATCTCTGAAGCAATCCCTCACAGACCCAGAAGGGTTTCTCAGCAATTGGAATTACTCTGATTCAAACCCATGTTCATGGAATGGGGTTACTTGCAATTTCCTAAAAGTCATATCCATAAGCATTCCAAAAAGCAAGCTTCATGGgtctcttccttcttccttaGGCTCTCTCTCCCAGCTCCGCCATGTCAATTTCAGAAGCAACAACCTCTTTGGGTCCATACCCACAGAGCTATTTCAAGCTCTAAAGCTTCAAAGTTTGGTCCTTTATGACAATTCCTTTTCTGGGTATGTCCCAAATGAGATTGGGAACCTCAGGTACATTCAAACTCTGGATTTATCCCAAAATTTCTTTAATGGGTCTTTCCCTAATGCTATTTTCTCCTGCAAGAGACTTCAATTTCTTGACCTCAGTGAGAATAACTTCACTGGGTCTCTCCCTAATAATGGGTTTGTGGGGTTTGATTTGGATGAGCTTCTAAAAGCTTCAGCTTTTGTGTTGGGGAAGAGTGGGATAGGGATTGTGTACAAAGTGGTGTTTGAAGATGGGCTTACATTGGCTGTGAGAAGATTAGAGGAAGGAGGTTCTCAAAGGCTTAAAGAATTTCAGAATGAAGTTGAAACCATTGGGAAAATGAGGCATCCTAATGTTGTCACTCTCAGAGCCTATTATTGGTCTAttgatgagaagcttctcatctaTGATTTTGTACCCAATGGAAGCCTTGCTTCAGCAATTCATGGAAAGGCAGGACTTGTAACATTCACACCTCTATCATGGTCCATGAGGCTGAAAATCATGAAAGGAATTGCAAAAGGATTGGTGTACTTGCATGAGTTTAGCCCCAAGAAATTTGTCCATGGAGACTTGAAGCCAAGCAACATACTTCTAGGGCAAAACATGGAACCCTGCATCAGTGATTTCGGACTCGGACGCCTCGCAAACATTGCTGGATTAGGAAGGCCCATGACCGTGCAATCGAACCGTGTTGCAGCAGAGAAACCCCACGAAAAACACAAGCGCGCGTCTTCCTCATCAGAAGTCGGTgcatcaacaacaacaatcagtAGTACCTTAGGAAATGGCTATCGAGCTCCGGAATCACTCAAAGTAATGAAGCCATCGCAGAAATGGGATGTTTATTCGTACGGTGTGATTCTTCTTGAAATGATCACAGGACGATTGCCCCTTGTGCAAGTAAATAACTTCGAAATGGACCTTGTTCAATGGATTCAGTTCAGCATTGAGGAGAAGAAGCCATTCAAAGATGTTTTGGACCCTTATTTGGCTCAAGATGCTGATAGGGAAGATGAGATTGTTTCTGTTTTGAAGATGGCAATGGCTTGTGTCCACGGAAGCCCCGAAAAGCGGCCGGCGATGAGGCATGTTCTTGAGGGCTTGCATAGGTTGTCTGTTTCCTATGATTGA 1680 0.4321 MGRVWKEVQIIGHESSSAIYGEDSFKRLILVLWATFVTLSLLAAIIFFCADAATKDSNKPSAANDHSSACAAAGCGGGCGSALLSLKQSLTDPEGFLSNWNYSDSNPCSWNGVTCNFLKVISISIPKSKLHGSLPSSLGSLSQLRHVNFRSNNLFGSIPTELFQALKLQSLVLYDNSFSGYVPNEIGNLRYIQTLDLSQNFFNGSFPNAIFSCKRLQFLDLSENNFTGSLPNNGFVGFDLDELLKASAFVLGKSGIGIVYKVVFEDGLTLAVRRLEEGGSQRLKEFQNEVETIGKMRHPNVVTLRAYYWSIDEKLLIYDFVPNGSLASAIHGKAGLVTFTPLSWSMRLKIMKGIAKGLVYLHEFSPKKFVHGDLKPSNILLGQNMEPCISDFGLGRLANIAGLGRPMTVQSNRVAAEKPHEKHKRASSSSEVGASTTTISSTLGNGYRAPESLKVMKPSQKWDVYSYGVILLEMITGRLPLVQVNNFEMDLVQWIQFSIEEKKPFKDVLDPYLAQDADREDEIVSVLKMAMACVHGSPEKRPAMRHVLEGLHRLSVSYD 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2728 559 Gene3D Ribonuclease Inhibitor 80 246 IPR032675 -
Sto6g2728 559 Gene3D Transferase(Phosphotransferase) domain 1 322 558 - -
Sto6g2728 559 Pfam Protein kinase domain 251 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2728 559 Pfam Leucine rich repeat N-terminal domain 81 116 IPR013210 -
Sto6g2728 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 369 381 IPR008271 GO:0004672|GO:0006468
Sto6g2728 559 Gene3D Phosphorylase Kinase; domain 1 251 321 - -
Sto6g2728 559 CDD STKc_IRAK 251 554 - -
Sto6g2728 559 SMART serkin_6 250 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2728 559 SUPERFAMILY L domain-like 76 232 - -
Sto6g2728 559 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 236 558 - -
Sto6g2728 559 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 78 233 - -
Sto6g2728 559 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 78 233 - -
Sto6g2728 559 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 236 558 - -
Sto6g2728 559 SUPERFAMILY Protein kinase-like (PK-like) 250 551 IPR011009 -
Sto6g2728 559 ProSiteProfiles Protein kinase domain profile. 245 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2728 559 MobiDBLite consensus disorder prediction 415 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2728 Sto-Chr6 34423087 34434422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2728 230 559 Receptor kinase-like Gene Family AT2G01210 67.066 1.09e-154 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto6g2728 Pkinase 8.9e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2728 6 34423087 34434422 Sto6g2728 6 34423087 34434422 ECH