Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2725 ATGGAGGCGCCTTCACCACCTCCGCCCACTGCTCCGCCGCTCTCCTCCGCCGTTCCGGCGCCGACGCTACCCACTCACCTCAACTACCCTGACTCAGTCGACTCCTCCCCCCGCTCCCGAAACACCGACTCCTGGGATGATCCCTTCCCTCCGGCCGCCGCCTCCACCAAGCTCCGCCTCATGTGCAGCTACGGCGGCCACATCGTCCCCCGTCCGCACGACAAGTCCCTCTGTTACGTCGGCGGCGACACCCGAATCGTCGTGGTTGACCGTAACACCTCTCTCTCCGACCTCTCGTCGCGACTCTCCAAAACCTTCCTCAACGGCCGCCCTTTCACTCTCAAATACCAGCTCCCCAGTGAAGACCTCGATTCCTTGATTTCTGTCACTACCGATGAAGACTTCGATAATATGATCGATGAATACGACAGGACAGCGTCGAATTCGGCGGTTAAACCCTCCAGAATCCGCCTATTTCTCTTCCCGACGAAGCCGGATTCGTCGCAATCAATTGGGCCCATCCTTGACAATTCGGCGAAATCGGAGGACTGGTTTCTCAACGCGCTAAACGGCGCCGGATTGCTGAATAGAGGGTTTTCCGAGTCCGCTTCGGTGAATTGCTTGCTAGGTCTCGACGAAGAGAGTGGTGGTGGGAATAATCTGGACTCGAATTCGAGGGAAAACGAAGTTGTTCAACAATCCGGATCTTTCGGGAATTGCAAGAATGTGAAGCAAGGACAAGATGTTCACTCTGTGCCGGATTCTCCTATGCTGGAAACGACGTCGTCTTTTGGGTCTACTTCCTCGTCGCCTTCGCTCGCGAATTTGCCTCCGATTAGGGTCCACGTGGTGGAAGATGGTGGTGGTAGCGTGAGGATGCAAGATCACAAGGTGGTGGTGGGGATTGAGGAACAGTTCTCTCAAATGGGTATCGGTGGTGGTGGTGTTGTGCAGAAGCAGCAGCAGCAGGATGAAGGTTTCGTTGTGCTGTCTTCTCCTCCTCCTATGCCGGCGGTCGTCACGGCTGCGCCGATCAGCTCTGGAGTAGTCGCCGGCGAGTACCAGAATcgagttttctccgatgacgAGAGATCGGACCATGGCGTGCCCGTGGGTTACCGAAAACCTCCGACGCCACAGCCGCAAACACAGCCTCAGCCTCAGCCTCAGAGTCTGCCTCCCCAATTTCAACAGAAGTCAAACGCCATCGTCGATTTGCCTTCCCCAGATTCCGTTTCGAGTGATAATAGTATATCAAATCCATTATCTCGCCCAAAACCTGTAATCTATCAAGAACAAGTACAAATTCCCACTGTAACTACAAGGGTTCCTAGTAATCCTATTGATCCAAAGCTGAATATGTCTGATCCTCACACTCGGATCCAGATACAGCAACAAGTGCAGGACCCTGGATATGTATTGCAACCACAATTTGATCAGCagcaaccacaaccaccacAGCAGCAACAGCAATATTTGCATAACACCCATTTCATTCACCATACTCCGGCCGGGGCTGTGCCGATGCCGCAATACTATCCTGTATATCCTTCCCAGCAACAATCCCACCATCCTCAGCATCACCCTCAGATGGATCAGCAATATCTTTACTACATGCCTGCTAGACAGGCGTACAACATCGGTGATGCTACTGGCGCGACCGTCCCTTCTAGCCGCCCACAAACTCAGCCGAATCCGCCATCGGCTGCTTACAATCCTATAAGAAATGTTCCCATGCCGAAATCGGAAATGACTGCCGGCGCATACAGAGCAGCAAATGCTGGGGCTCCACAGATAGTTCAAGTTCCTTCTACTCAGCATCAGCAACAGTTTGTTGCTTATACTCAGATTCATCATCCTTCTCAGACGGTTGCGCCGCCGAATTCTGCTGCACCGGCTAGTTATGCTTATGACTATGTCGATCCGGCTCATGCTCAGGTGTACTACACTCAACCTATGGCTCCTATGCCTTCACAGTACCAAACCATGGCTGCTCCTGCTGGTGTTATACCAGAAGCTTCTTCTCAGATTCCTTCCGACAGCATAAAGCAGCAGATAAGAACTTCACAgccaatataa 2079 0.5166 MEAPSPPPPTAPPLSSAVPAPTLPTHLNYPDSVDSSPRSRNTDSWDDPFPPAAASTKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVDRNTSLSDLSSRLSKTFLNGRPFTLKYQLPSEDLDSLISVTTDEDFDNMIDEYDRTASNSAVKPSRIRLFLFPTKPDSSQSIGPILDNSAKSEDWFLNALNGAGLLNRGFSESASVNCLLGLDEESGGGNNLDSNSRENEVVQQSGSFGNCKNVKQGQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDGGGSVRMQDHKVVVGIEEQFSQMGIGGGGVVQKQQQQDEGFVVLSSPPPMPAVVTAAPISSGVVAGEYQNRVFSDDERSDHGVPVGYRKPPTPQPQTQPQPQPQSLPPQFQQKSNAIVDLPSPDSVSSDNSISNPLSRPKPVIYQEQVQIPTVTTRVPSNPIDPKLNMSDPHTRIQIQQQVQDPGYVLQPQFDQQQPQPPQQQQQYLHNTHFIHHTPAGAVPMPQYYPVYPSQQQSHHPQHHPQMDQQYLYYMPARQAYNIGDATGATVPSSRPQTQPNPPSAAYNPIRNVPMPKSEMTAGAYRAANAGAPQIVQVPSTQHQQQFVAYTQIHHPSQTVAPPNSAAPASYAYDYVDPAHAQVYYTQPMAPMPSQYQTMAAPAGVIPEASSQIPSDSIKQQIRTSQPI 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2725 692 SMART PB1_new 72 163 IPR000270 GO:0005515
Sto6g2725 692 MobiDBLite consensus disorder prediction 674 692 - -
Sto6g2725 692 PANTHER OS05G0427100 PROTEIN-RELATED 13 683 - -
Sto6g2725 692 MobiDBLite consensus disorder prediction 553 575 - -
Sto6g2725 692 MobiDBLite consensus disorder prediction 671 692 - -
Sto6g2725 692 MobiDBLite consensus disorder prediction 237 272 - -
Sto6g2725 692 MobiDBLite consensus disorder prediction 1 50 - -
Sto6g2725 692 MobiDBLite consensus disorder prediction 393 426 - -
Sto6g2725 692 MobiDBLite consensus disorder prediction 1 19 - -
Sto6g2725 692 MobiDBLite consensus disorder prediction 28 43 - -
Sto6g2725 692 CDD PB1_UP2 61 161 - -
Sto6g2725 692 Pfam PB1 domain 73 162 IPR000270 GO:0005515
Sto6g2725 692 PANTHER EXPRESSED PROTEIN 13 683 - -
Sto6g2725 692 MobiDBLite consensus disorder prediction 374 392 - -
Sto6g2725 692 Gene3D - 77 162 - -
Sto6g2725 692 SUPERFAMILY CAD & PB1 domains 73 171 - -
Sto6g2725 692 MobiDBLite consensus disorder prediction 359 431 - -
Sto6g2725 692 ProSiteProfiles PB1 domain profile. 57 163 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2725 Sto-Chr6 34393188 34395453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2725 52 221 MAP Kinase Kinase Kinase AT1G79570 34.706 1.12e-25 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2725 6 34393188 34395453 Sto6g2725 6 34393188 34395453 ECH