Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2685 ATGGCCGCATCGCCGTCTACTGCGGCCACCGTCAACGTCATGCTTGCCATCTTCGAGAAGAAGACGAACCCGATCGATCTCTATCGTCCTCTCCGCAACTATGTCGCTTTCCACTACTCCGAACGCGAGGCCCAGAACCTCGATGACGACTTACAAACCCTCAAGCAACTCCGTTCCGACATCGAGCGCCACTCTGACCCTTCCCTGACCTCTCGCCGTGACCTCCTTCAATCCTACTATAAAGCTCTCTGCCTCGTGGAGACTCGTTTTCCCATCTCCTCTGACCAAGATCACGTCAACACTCTCAGCTTTGTGTGGTTCGATGCGTTTAAGCCTAAACAGAAGGCGACGCAGCAGAATATTCACCTCGAGAAAGCTGCGGTGTTGTTCAATTTGGGTGCGGTTTATAGTCAGATTGGGCTGTCCTATGATCGGAATACTGTTGATGGACGGAGGCAGGCTTCGCATGCGTTTATTGCAGCTGCTGGTTCGTTTGCTTACCTGAAGGATAATGCGGCAATGAAAGCGTCAATTGGGAGTTCCACAACAGTCGATGTGTCAGTTGAGTGCGCAGGAATGTTGGAGAGGTTAATGCTTGCACAGGCACAAGAGTGCGTGTTTGAGAATACCATTGCCAAAGGAAGCACCCCGATTGTTTGTGCGAAGATCTCTAGGCAGGTTGGGCTATACTATGAGGAAGCTTTAGCTGCATTGAATGTTGCACCTCTAAACCAGCATTTTGATAAGGGATGGATAGCTCATGTGCAGCTAAAGACAGCTCTTTTCTTCGCAGAAGCTTGCTATAGGTATGGATTAGAACTGCatgagaaagaagaaatagCTGAGGAGATTGCAAGACTGAGGAGTGGGGTTAATGCTTTAACTGAGGCAAAGAAAAGCTCAAAGGGTGCTGCAGCACAAATCCTTGATGCAATTAGTAAATTAGAGGCCAATCTTAACCGAAACCTGGAAAGGGCTGTCAAAGAGAATGATAGAGTTTACCTCATGAGGGTTCCTTCTCCCAATTCCTTACCACCACTTCCTGCATTTTCCATGGTGAAGCCAATGGCAATGAATGAAGTATTGGATGCAAGCAAAGAGAAACTGTTTGCAAGTCTTGTTCCTGACAGTAGTGCAAAGGCTCTCTCCAGGTACACTGAAATGGTAGATGAAATTATAAGAACACAGGCTGAAAAATTACAACAAGCTAGTGAATTAACCCGAGTTAGGCTTAAGGAAATGGAGCTTCCTGATTCTATTCTTGCTTTGGAAGGAAATTTTACTCTACCAACAAATCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGTCCTGCTGGTTTGGAAGCAGAGTTGCAGCAACTTAAGGACCTAAGGAGAGTGAATCAGGAATTGCTAGTCCAGACTGAGGAGCTGTTGCAGAAGGAAGCAAGAGAAGATGCTCAATTTAGAAGCCAATTCGGGACAAAGTGGACTAGGCCTCAATCAAGCACTTTGACAAAGAACTTGCAGGATAGGCTAAATAGGTTTGCAGGTAACTTGAAGCAAGCTGCAGAAAGTGATGGTCGGATTGAGCGCTCAATCAGAGAGCATTCAGCATTCATGGCAATCCTTGACAGCCGTCCGATTGAATCTGCACTCCCTTCCTTGGCAAGGCCGATAATGTCTTTGGATGCCAATGAAGATGCTGTTGTGGGGTCCCTCAAGCAGAGCTTGAGGCAGCTAGAAACACTGGGAGCTCAACGGGCTggtcttgaagacatgcttaaAGAGATGAAAAGAAAGGATGATATACTACCCAAGTTGATGACATCAACTGGGTCTTATGAGGATCTTTTCAAGAAAGAGATAGCAAAATATGACCATATTTGTGAAGAAATAGCCAAAAATATCGAGGCACAAGAGCAGTTGTTGATGCAGATCCAGGCTCAAAATGATGAGTTCTCTGCTATCTTTAATCTTGAAGATTACAAAGCTTCACGTGAAAAATGCTACAAGCAGATTGAAGCTGCCATAGCAAAGTATCAAGAAATAAAAGATAACGTCAATGAAGGGTTGAAATTTTATGTGACACTGCAGGATGCAATCACCAATGTAAAGCAGCAATGCAGTGACTTTGTAATGACCAGGAACATCCAGTGCAGGGAAATGATTGAAGATGTGCAGAGACAAATGGCTGGTCTCAGTTTCCAGGATAACAAAACTGCAGGCCCTTCGACCAGCAGCTACCCTTCGGTGGGACACCAGACCCAAAGATCCTATCCACCGCAAACAGATTCTCGCCCCCAACCTCCCTCCTATTATCAACCACCCGAGCAGCCACCGGCAGCACCGGCTGGATATGCTCAGCCACCTCCTCCCTACGGTTTGCATCAGCCTCCTTCTCCATACCACATTCCGCACACATCGGCTACTCCATACCCTCCTTCTCAAGTCCATCAGCAGCCAACAACGAGCCATGACTATGGCCAACCTGCATATCCTGGATGGCGTGGTCCATATTATAATGCGCAAGCGCAACAACCTACATCGGTTCCTCGGCCTCCGTATACCATTCCAGGTCCATATCCTCCTCCTCACCAAAGTAGCGGCTACTATAAGCAGCAATAG 2613 0.4646 MAASPSTAATVNVMLAIFEKKTNPIDLYRPLRNYVAFHYSEREAQNLDDDLQTLKQLRSDIERHSDPSLTSRRDLLQSYYKALCLVETRFPISSDQDHVNTLSFVWFDAFKPKQKATQQNIHLEKAAVLFNLGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAYLKDNAAMKASIGSSTTVDVSVECAGMLERLMLAQAQECVFENTIAKGSTPIVCAKISRQVGLYYEEALAALNVAPLNQHFDKGWIAHVQLKTALFFAEACYRYGLELHEKEEIAEEIARLRSGVNALTEAKKSSKGAAAQILDAISKLEANLNRNLERAVKENDRVYLMRVPSPNSLPPLPAFSMVKPMAMNEVLDASKEKLFASLVPDSSAKALSRYTEMVDEIIRTQAEKLQQASELTRVRLKEMELPDSILALEGNFTLPTNLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQELLVQTEELLQKEAREDAQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDGRIERSIREHSAFMAILDSRPIESALPSLARPIMSLDANEDAVVGSLKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFKKEIAKYDHICEEIAKNIEAQEQLLMQIQAQNDEFSAIFNLEDYKASREKCYKQIEAAIAKYQEIKDNVNEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCREMIEDVQRQMAGLSFQDNKTAGPSTSSYPSVGHQTQRSYPPQTDSRPQPPSYYQPPEQPPAAPAGYAQPPPPYGLHQPPSPYHIPHTSATPYPPSQVHQQPTTSHDYGQPAYPGWRGPYYNAQAQQPTSVPRPPYTIPGPYPPPHQSSGYYKQQ 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2685 870 MobiDBLite consensus disorder prediction 732 758 - -
Sto6g2685 870 ProSiteProfiles BRO1 domain profile. 12 407 IPR004328 -
Sto6g2685 870 Coils Coil 576 596 - -
Sto6g2685 870 MobiDBLite consensus disorder prediction 759 804 - -
Sto6g2685 870 PANTHER PCD6 INTERACTING PROTEIN-RELATED 3 857 IPR045251 GO:0071985
Sto6g2685 870 Coils Coil 625 645 - -
Sto6g2685 870 Coils Coil 44 64 - -
Sto6g2685 870 SMART BRO1_2 13 397 IPR004328 -
Sto6g2685 870 Coils Coil 449 476 - -
Sto6g2685 870 PANTHER PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN-LIKE 3 857 - -
Sto6g2685 870 MobiDBLite consensus disorder prediction 847 861 - -
Sto6g2685 870 MobiDBLite consensus disorder prediction 732 870 - -
Sto6g2685 870 MobiDBLite consensus disorder prediction 805 823 - -
Sto6g2685 870 Gene3D alix/aip1 like domains 421 702 - -
Sto6g2685 870 CDD BRO1_Alix_like_1 14 369 - -
Sto6g2685 870 CDD V_Alix_like_1 375 711 - -
Sto6g2685 870 Gene3D alix/aip1 in complex with the ypdl late domain 375 653 - -
Sto6g2685 870 Pfam ALIX V-shaped domain binding to HIV 429 713 IPR025304 GO:0005515
Sto6g2685 870 Pfam BRO1-like domain 14 393 IPR004328 -
Sto6g2685 870 Coils Coil 277 297 - -
Sto6g2685 870 Gene3D alix/aip1 like domains 9 374 IPR038499 -
Sto6g2685 870 Coils Coil 662 682 - -
Sto6g2685 870 Coils Coil 309 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2685 Sto-Chr6 34043810 34052084 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2685 6 34043810 34052084 Sto6g2685 6 34043810 34052084 ECH