Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2672 ATGGTGGCTTTTGGCGGGAAAAAAGTGCGCCAAATGGTCGCAGGCATCGGTGGTAACGGCCTCGGCCAGGTCCTTACTGCGGTGGCCGTGACTCTCCTCGTCCGCCTCTTCTCCGGTCCCGGCCCGGTGCTCTTGCCGGAATCGGAGAACGATTACTCCGGAGACGAGGAGAAGGGTGTTGATGACGGCGACGGCGAAGGCGAAGGCGAAGGACCGGTCTCCGGCAGGGTTTTTCCGGTCACAATCCGGTGGAGCAACATTGCGTGCTCCCTCTCTGATAAATCCTCCAAGTCTGTGAGATTTTTGCTTAAAAATGTGAGCGGAGAAGCAAAGCCTGGAAGATTATTAGCTATAATGGGGCCGTCAGGTTCTGGGAAAACTACATTGCTTAATGTTCTTGCGGGTCAGCTGGCTGCATCACCTCGGCTGCATTTGTCAGGCCTTTTGGAGTTCAATGGCAAACCTAGTTCAAAGAACACTTACAAGTTTGCTTACGTAAGACAGGAGGATCTATTTTTCTCACAGCTTACAGTGCGTGAGACATTATCCCTTGCTACAGAACTCCAGCTTCCTGGAATATCTTCTGTGGAAGAGAGAGATGAATATGTGAAGAATCTACTGTTCAAACTAGGCTTGGTCAGCTGTGCTGATACCATTGTTGGCGATGCAAAAGTTCGGGGAATCAGTGGTGGTGAAAAGAAACGCTTATCTCTGGCATGCGAGCTACTTGCAAGCCCATCTGTTATATTTGCTGATGAACCTACAACTGGACTTGATGCCTTCCAGGCTGAAAAAGTGGTGGAAACTCTGCAACAACTTGCACAAGATGGTCATACTGTAATTTGTTCTATACATCAACCAAGAGGTTCTGTGTATGACAAATTTGACGACATTGTCTTGCTAACAGAGGGGTCCCTTGTTTATGCTGGTCCTGCTCATAATGAACCATTGGCATACTTCTCAGAATTTGGGTACCACTGCCCTGATCATGTGAATCCTGCTGAATTTTTGGCTGACCTTATATCCATTGACTACAGTTCTGCTGACAGTGTTGATTCCTCTCAAAAGAGGATTGATGGTCTTGTTGAGTCATTCTCTCAAAGACAGTCTACTATAATTTATGCAACTCCAATTACCGGAAAAGTGATCCACAAAAGAGGAATAAGAACTGTAGCTAAGAAGAAAGGAGGTTGGTGGAAACAGTTCTGGTTGCTCCTTAGGCGAGCATGGATGCAgGCTTCCCGTGATGGACCAACAAACAAAGTTCGAACAAGGATGTCAATTGCATCAGCGATTATATTTGGTTCAGTTTTTTGGAGAATGGGAAGATCCCAGACTTCAATACAAGACCGAATGGGATTGCTTCAGGTTACTGCAATAAACACAGCTATGGCTGCTCTTACAAAGACGGTTGGTGTGTTTCCAAAGGAGCGTGCAATTGTGGATAGAGAACGTGCAAAGGGCTCCTATGCCTTGGGTCCTTATCTCTTTTCAAAATTGTTGGCTGAGATTCCCATTGGAGCAGCATTTCCATTGATGTTTGGTGCTGTTTTGTACCCTATGGCACGTCTTCATCCTACCTTACAGAGATTTGGGAAATTCTGTGGTATAGTCACAGTGGAATCTTTTGCTGCATCTGCAATGGGTCTTACTGTTGGAGCTATGGTTCCAACCACTGAAGCCGCCATGGCAGTGGGTCCCTCTCTTATGACTGTTTTTATTGTATTTGGAGGCTATTATGTCAATCCTGAAAATACTCCAATCATCTTCCGCTGGATTCCCCGTTGTTCTTTGATTAGATGGGCCTTTCAGGGACTTTGCATCAATGAATTTAGTGGTCTTGAATTTGAACAACAGAAACCCCAGGATCTTCAAACGGGAGAACAGGTATTGGAGCGATATTCTTTGGGAGGATGCCGAATTCAGGATACAGTGGCAGCACAAAGTAAAATACTGTTATTTTGGTATTGCACCACCTACCTCCTCCTTGAGAAAAACAGGTCCAAGTACCAACAACTTGAGCCACCCCCTCTTGACCACAACAAATCGCATTCAAAACTTGAGGATTCTAACCCTCAACAACATGACCACCCACTTGAAGAACCTGAACCTGTGCCAGTCAGTGAAGTTGAAGAGGATGACTTCTTGAATCCTGACTTTTACAGAGCCAATAAGCTCGTGTTTTCTATAATCAGCTTAGGAATGTCATTAAGGGCAATACTTGCAATAATAAGTCATAGTGGATCTTTTTGGGATATATCATGTTTGAATATAGCAGTTTCTTTTGGTCATTATAAATATCACAATCTTTCCAAGGATGGGTTTTCTTGA 2331 0.4487 MVAFGGKKVRQMVAGIGGNGLGQVLTAVAVTLLVRLFSGPGPVLLPESENDYSGDEEKGVDDGDGEGEGEGPVSGRVFPVTIRWSNIACSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEFNGKPSSKNTYKFAYVRQEDLFFSQLTVRETLSLATELQLPGISSVEERDEYVKNLLFKLGLVSCADTIVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTVICSIHQPRGSVYDKFDDIVLLTEGSLVYAGPAHNEPLAYFSEFGYHCPDHVNPAEFLADLISIDYSSADSVDSSQKRIDGLVESFSQRQSTIIYATPITGKVIHKRGIRTVAKKKGGWWKQFWLLLRRAWMQASRDGPTNKVRTRMSIASAIIFGSVFWRMGRSQTSIQDRMGLLQVTAINTAMAALTKTVGVFPKERAIVDRERAKGSYALGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTLQRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPRCSLIRWAFQGLCINEFSGLEFEQQKPQDLQTGEQVLERYSLGGCRIQDTVAAQSKILLFWYCTTYLLLEKNRSKYQQLEPPPLDHNKSHSKLEDSNPQQHDHPLEEPEPVPVSEVEEDDFLNPDFYRANKLVFSIISLGMSLRAILAIISHSGSFWDISCLNIAVSFGHYKYHNLSKDGFS 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2672 776 MobiDBLite consensus disorder prediction 45 74 - -
Sto6g2672 776 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 679 - -
Sto6g2672 776 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 82 328 IPR003439 GO:0005524
Sto6g2672 776 SMART AAA_5 112 305 IPR003593 -
Sto6g2672 776 MobiDBLite consensus disorder prediction 679 704 - -
Sto6g2672 776 CDD ABCG_EPDR 79 310 - -
Sto6g2672 776 ProSitePatterns ABC transporters family signature. 228 242 IPR017871 GO:0005524
Sto6g2672 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 313 IPR027417 -
Sto6g2672 776 Gene3D - 80 318 IPR027417 -
Sto6g2672 776 Pfam ABC-2 type transporter 401 611 IPR013525 GO:0016020|GO:0140359
Sto6g2672 776 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 679 - -
Sto6g2672 776 Pfam ABC transporter 103 255 IPR003439 GO:0005524
Sto6g2672 776 MobiDBLite consensus disorder prediction 673 708 - -
Sto6g2672 776 Pfam ABC-2 type transporter 285 342 IPR043926 GO:0140359
Sto6g2672 776 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2672 Sto-Chr6 33872177 33880830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2672 102 315 Calmodulin-binding Proteins AT2G36910 29.358 1.07e-10 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2672 6 33872177 33880830 Sto6g2672 6 33872177 33880830 ECH