Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2645 ATGGAAGGCCTCCCCAAAGGTTATCGTCCCAACGTTGGAGTCTGCCTTATCAACTCCGATTTTCAGgtTTTTGTGGCTTCTAGATTAAATGTCCCAGGAGCATGGCAAATGCCTCAGGGAGGTATCGAGGATGGTGAAGAGCCCAAATCTGCTGCCATTAGAGAACTGCGAGAAGAAACCGGAGTAGTATCTGCTGAAATAATTGCTGAGGTTCCAAAATGGTTGACTTATGACTTCCCTCCTGCTGTGAAGGCTAAAGTCAATCGTCTCTGGGGAGGTGAATGGCATGGCCAGGCACAAAAATGGTTCCTTATGCGATTGACAAAAGATGACAGAGAGATCAACTTAGCTACTGGTGAAGCAGACCCAGAATTTGCAGAATGGAAGTGGGCAAACCCGGAAGAAGTTATTGAGCAGGctagtttcaaaaacttgcttATAGACATGGACTACAAGAGACCAACCTATGAAGAAGTTATAAGAACCTTCATGCCTTACTTTCAAGGGAATGCAATATCTGGCAAATCCCTCCCCACAAAATCCGGCTACCTCCCCATCAACCCCACCTCCAAATCCGCCATTTTCTACGCTTTCTACGAAGCCCAGCAGAACCCCACTTCCCTCCCTCTCTCCCAAACCCCACTCCTCATCTGGCTCCAAGGCGGCCCTGGCTGCTCCTCCATGATCGGCAACTTCTACGAGCTCGGCCCATGGCGCGTCACCAAATCCCTAACCCTAGAACCCAACCCTGGCTCCTGGAACCGAATCTTCGGCCTCCTTTTCCTCGACAACCCCATCGGAACAGGATTCAGCGTCGCTTCGACCCCGCAAGAAATCCCCAAAGACCAAGAATCAGTAGCGAAGCACCTCTTCGCCGCCATTACTAACTTCCTCGAACACGACCCAGTTTTCAAATATCGCCCAATTTACATCACAGGCGAAAGCTACGCCGGGAAGTACGTTCCATCAATTGGGTACTACATATTGCATCAGAACTCTCGTCTAAACATATCCCACAGGGTGAATCTCGCAGGTGTGGCAATTGGGGATGGATTAACAGATCCAATCACACAAGTAGCCACCCATGCTGTGAATGCTCATTATGTTGGATTGATCAACGAGAAGCAGAAGAATGAGTTGGAGAAGGCTCAAATGGAGGCAATAAGATTGACCCAATTGAGGGATTGGAGTGAAGCAACACACGCAAGAACAAGAATCTTGGGAATGTTACAGAACATGACAGGGCTGGCTACTCTGTATGATTACACAAGGAAAATCCCTTATGAGGATGATTTGGTGGAGGAGTTCTTGAAATCTAGTGAGGTGAAGAAGGCATTGGGAGTGGTGAATGAGTCTATTGTGTTTGAAGCATGTAGTGATGTGGTGGGGGATGTGTTGCATGAGGATGTGATGAAGAGTGTGAAGTACATGGTGGAGTATTTGGTGAGGAAGAGCAGGGTGCTTTTGTATCAAGGGCAGTATGATTTGAGAGATGGGGTGGTTCAGGTGGAGGCTTGGGTGAAGACAATGAAGTGGGAAGGGATTGGGGAGTTTTTGAGTGCAGATAGGAAGATTTGGAAGGTGAATGGTGAGATTGCAGGGTATGTGCAAAAATGGAGGAGTCTCACAAATGTGGTGGTTTTGGGAGCTGGACATCTTTTGCCTACTGATCAAGCTGTGAACTCTCAAGCAATGATAGAGGATTGGGTTTTGGagaagggtttgtttggaaatgagcaagagaagaagatgaatgtTTCACCAAGCTTGTGA 1773 0.4619 MEGLPKGYRPNVGVCLINSDFQVFVASRLNVPGAWQMPQGGIEDGEEPKSAAIRELREETGVVSAEIIAEVPKWLTYDFPPAVKAKVNRLWGGEWHGQAQKWFLMRLTKDDREINLATGEADPEFAEWKWANPEEVIEQASFKNLLIDMDYKRPTYEEVIRTFMPYFQGNAISGKSLPTKSGYLPINPTSKSAIFYAFYEAQQNPTSLPLSQTPLLIWLQGGPGCSSMIGNFYELGPWRVTKSLTLEPNPGSWNRIFGLLFLDNPIGTGFSVASTPQEIPKDQESVAKHLFAAITNFLEHDPVFKYRPIYITGESYAGKYVPSIGYYILHQNSRLNISHRVNLAGVAIGDGLTDPITQVATHAVNAHYVGLINEKQKNELEKAQMEAIRLTQLRDWSEATHARTRILGMLQNMTGLATLYDYTRKIPYEDDLVEEFLKSSEVKKALGVVNESIVFEACSDVVGDVLHEDVMKSVKYMVEYLVRKSRVLLYQGQYDLRDGVVQVEAWVKTMKWEGIGEFLSADRKIWKVNGEIAGYVQKWRSLTNVVVLGAGHLLPTDQAVNSQAMIEDWVLEKGLFGNEQEKKMNVSPSL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2645 590 Pfam Serine carboxypeptidase 177 570 IPR001563 GO:0004185|GO:0006508
Sto6g2645 590 Pfam NUDIX domain 8 138 IPR000086 -
Sto6g2645 590 SUPERFAMILY alpha/beta-Hydrolases 178 571 IPR029058 -
Sto6g2645 590 ProSitePatterns Serine carboxypeptidases, serine active site. 311 318 IPR018202 GO:0004185
Sto6g2645 590 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 162 - -
Sto6g2645 590 PRINTS Carboxypeptidase C serine protease (S10) family signature 249 261 IPR001563 GO:0004185|GO:0006508
Sto6g2645 590 PRINTS Carboxypeptidase C serine protease (S10) family signature 262 272 IPR001563 GO:0004185|GO:0006508
Sto6g2645 590 PRINTS Carboxypeptidase C serine protease (S10) family signature 297 322 IPR001563 GO:0004185|GO:0006508
Sto6g2645 590 PRINTS Carboxypeptidase C serine protease (S10) family signature 542 555 IPR001563 GO:0004185|GO:0006508
Sto6g2645 590 SUPERFAMILY Nudix 6 140 IPR015797 -
Sto6g2645 590 CDD Ap4A_hydrolase_plant_like 7 163 IPR022927 -
Sto6g2645 590 ProSitePatterns Nudix box signature. 40 61 IPR020084 GO:0016787
Sto6g2645 590 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 170 577 IPR001563 GO:0004185|GO:0006508
Sto6g2645 590 Coils Coil 373 393 - -
Sto6g2645 590 PRINTS NUDIX hydrolase family signature 35 49 IPR020476 -
Sto6g2645 590 PRINTS NUDIX hydrolase family signature 49 64 IPR020476 -
Sto6g2645 590 PANTHER CARBOXYPEPTIDASE 170 577 - -
Sto6g2645 590 Gene3D alpha/beta hydrolase 163 586 IPR029058 -
Sto6g2645 590 ProSiteProfiles Nudix hydrolase domain profile. 7 161 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2645 Sto-Chr6 33518784 33529917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2645 468 570 Calmodulin-binding Proteins AT2G22960 25.962 1.18e-06 47.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2645 6 33518784 33529917 Sto6g2645 6 33518784 33529917 ECH