Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2642 aTGGGCAAAAACGCTATCGCAGATCCTCCCAACTTCAAGAAATACGGCGTTCCTTTCTACTCAGTCTCATGGATTCCGCAAAACCTTCTCAAATCGCAACAGAATCAAACCACCGATGAGGCCTCCGACGCCGCCGACAGCTCTACGCCTCCGGGACGGTCTGGCGAGCACTATCTAACGCTTGCCGGCGGTGGTGGAGAAGGCCGAAGCGGTATTCCCAATGCTGTGTTGATAGCTCATTTCGACGTCGCATCTAACTCTCTCTCCGATCAACCGGTGGCTAAGCTTGGAACTGATTCTGAGTTGCCTTATAGAATGACACTTCACCCTAGTGGAGAAGGCCTTATTTGTGCAATGCCTAATAGTTGCAGATGGTTTGAATGGGATGAAAACAAGAGTGCAGAAATTCATAAGTTGGGCCTGAAGTCGTCAGAGAAAGTGCTCACTCAATTGGAGGATGTTGGGCAGCAGTTAGCATTGGCATTTAACAATGATGGTACTACACTAGCTGTTGGTGGGGAGGATGGCAATCTAAGGGTTTTTAAGTGGCCTAGCATGGAAATTATTCTCAATGAGACTAAAGCTCATTCTACAGTTAAAGACCTAAATTTCAGTTCTGATGGTAAGTTACTTGTCTCTTTGGGAAGCGGTGGCCCCTGCAGAGTTTGGGAACTTTCTTCATCAACGGTCTTAACTTCTATATCAAGTAAAAATCGAGAGATTTTTAGCTCTTGCAGATTTTCTCAAATTAATGATAGGAACCATGTCTTGTATATCGCTGCCATGACAGACAAAGGTGGAAGCATTCTGACATGGGACACAAAGACAGGGGAAATGATGGGGTCAAAGCATATTATTCGTGATGCAATCTCTGCATTGAATGTCTCTGCTGATGGGAAGTTTCTCGCGTGTGGAACACCTTCAGGAGACGTTGTGATTGTAAGTTCAACAAACATGCAGATACATACAACGATAAAAAAGGCTCACCTTGGCATAGTAACTGCATTAGCATTCTCCCCTGATTCAAGGGCCTTGGCTTCTGTGTCCTTGGATTCAAGTGCAAGGGTTACACTAATTGAGGAGAAGAGGAAAAGTGGTATGTGCATATAA 1110 0.4505 MGKNAIADPPNFKKYGVPFYSVSWIPQNLLKSQQNQTTDEASDAADSSTPPGRSGEHYLTLAGGGGEGRSGIPNAVLIAHFDVASNSLSDQPVAKLGTDSELPYRMTLHPSGEGLICAMPNSCRWFEWDENKSAEIHKLGLKSSEKVLTQLEDVGQQLALAFNNDGTTLAVGGEDGNLRVFKWPSMEIILNETKAHSTVKDLNFSSDGKLLVSLGSGGPCRVWELSSSTVLTSISSKNREIFSSCRFSQINDRNHVLYIAAMTDKGGSILTWDTKTGEMMGSKHIIRDAISALNVSADGKFLACGTPSGDVVIVSSTNMQIHTTIKKAHLGIVTALAFSPDSRALASVSLDSSARVTLIEEKRKSGMCI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2642 369 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 7 368 IPR045260 GO:0005085
Sto6g2642 369 ProSiteProfiles Trp-Asp (WD) repeats profile. 192 233 IPR001680 GO:0005515
Sto6g2642 369 SMART WD40_4 144 182 IPR001680 GO:0005515
Sto6g2642 369 SMART WD40_4 186 224 IPR001680 GO:0005515
Sto6g2642 369 SMART WD40_4 318 358 IPR001680 GO:0005515
Sto6g2642 369 SMART WD40_4 276 315 IPR001680 GO:0005515
Sto6g2642 369 MobiDBLite consensus disorder prediction 32 65 - -
Sto6g2642 369 MobiDBLite consensus disorder prediction 32 49 - -
Sto6g2642 369 Gene3D - 51 365 IPR015943 GO:0005515
Sto6g2642 369 PANTHER SEC12P-LIKE 2 PROTEIN-RELATED 7 368 - -
Sto6g2642 369 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 78 356 IPR011047 -
Sto6g2642 369 Pfam WD domain, G-beta repeat 159 181 IPR001680 GO:0005515
Sto6g2642 369 Pfam WD domain, G-beta repeat 327 356 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2642 Sto-Chr6 33474560 33481237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2642 113 305 Miscellaneous Gene Families AT5G08390 25.258 1.66e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2642 6 33474560 33481237 Sto6g2642 6 33474560 33481237 ECH