Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2626 ATGGCGTCTGAAATTTCGAAGTTGGAAACTGATGTGCACTTGAAGGCTACTGCCGAGCAGTTCCATGATGTTTTCTGCAGCAGAACTCATCATATTGCCAATGTTTGTCCTGAGAAGGTTCAAGGAGTTGAGATTCATGAAGGAGAATGGGGCACTGAGGGATCCATCATCTTCTGGAACTATAAGTGTGTAGCCAAAGAGCTGATAGAGTCCATAGACAGAGTGAACAACATCGCAACCTTCAAAGTGTTAGAAGGGGATCTTCTAGAAGACTACAAGAGCTTCAGGATCACAATCCAAGTGATCCCACAGGAGAATGGAAGTAGAGCACATTGGATAATGGAGTATGAGAAGCTCAAAGACCACACTCCCGATCCTCACACCTTGCTTGAATTTGCCATTGATGTGAGCAAGGACATTGATGCTCATCTCACTCAGCCTCAAGTTTCAAGGCTGGAAACTGATGTCCATATAAAGGCAAGTGCCGAGCAGTTCCATGATGTCTTCTGCAGTAGGACTCACCATATTGCCAATGTCTGTCCTGAGAAGATTCAGGGAGTTGAGATTCATGAAGGAGAATGGGGCACTGAGGGATCCATCATCTTCTGGAATTATGTTCATGatgGGAAGAAATGTGTAGCTAAAGAGGTGGTGGAGTCAATAGACAGAGagaataacaaaataacattcAAAGTGTTAGAAGGAGATCTTCTGGAAGACTATAAGAGCTTCAAGATCACAATCCAAGTGTTCCCACAGGAAAAAGGAAGCAGAGTGCATTGGATAATGGAGTTCGAGAAGCTCAAAGACCACATTCCCGATCCTCACTCTTTGCTTCAATTGGCCATCGAAGTGAGCCATGACATTGATGCTCACCTTACTCAAGATGGCCAAAACAAGTAA 903 0.4341 MASEISKLETDVHLKATAEQFHDVFCSRTHHIANVCPEKVQGVEIHEGEWGTEGSIIFWNYKCVAKELIESIDRVNNIATFKVLEGDLLEDYKSFRITIQVIPQENGSRAHWIMEYEKLKDHTPDPHTLLEFAIDVSKDIDAHLTQPQVSRLETDVHIKASAEQFHDVFCSRTHHIANVCPEKIQGVEIHEGEWGTEGSIIFWNYVHDGKKCVAKEVVESIDRENNKITFKVLEGDLLEDYKSFKITIQVFPQEKGSRVHWIMEFEKLKDHIPDPHSLLQLAIEVSHDIDAHLTQDGQNK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2626 300 SMART Bet_v_1_2 3 147 IPR000916 GO:0006952
Sto6g2626 300 SMART Bet_v_1_2 148 296 IPR000916 GO:0006952
Sto6g2626 300 CDD Bet_v1-like 152 293 - -
Sto6g2626 300 PANTHER MLP-LIKE PROTEIN 34-RELATED 150 293 - -
Sto6g2626 300 PANTHER MLP-LIKE PROTEIN 34-RELATED 5 144 - -
Sto6g2626 300 CDD Bet_v1-like 7 144 - -
Sto6g2626 300 SUPERFAMILY Bet v1-like 5 145 - -
Sto6g2626 300 PANTHER MLP-LIKE PROTEIN 423 5 144 - -
Sto6g2626 300 PANTHER MLP-LIKE PROTEIN 423 150 293 - -
Sto6g2626 300 SUPERFAMILY Bet v1-like 148 294 - -
Sto6g2626 300 Pfam Pathogenesis-related protein Bet v 1 family 149 295 IPR000916 GO:0006952
Sto6g2626 300 Pfam Pathogenesis-related protein Bet v 1 family 6 145 IPR000916 GO:0006952
Sto6g2626 300 Gene3D - 1 146 IPR023393 -
Sto6g2626 300 Gene3D - 147 296 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2626 Sto-Chr6 33297613 33301142 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2626 6 33297613 33301142 Sto6g2626 6 33297613 33301142 ECH