Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1202 ATGACTACCAGGGGTGAACACCAAACCATCCCCCTTTCAGTGCTTCTGAAGCGTGAATTGGCAAACGAGAAAATTGAGAAACCAGAAATTGTACATGGTCAAGCCAGCCAGAGCAAGAAAGGCGAAGATTTCACGCTACTAAAGACGGAATGCCAAAGGGTTGTGGGAGATGGGGTGTCTACTTATTCTGTTTTTGCGCTATTTGATGGACACAATGGTTCTGCTGCCGCTATTTATTCCAAGGAGAATctcttaaataatattttaagtgCGGTTCCTCCAGATCTTAACAGAGATGAGTGGGTGTCAGCATTGCCAAGGGCTTTGGTTGCAGGCTTTGTTAAAACCGATAAAGATTTTCAAGAGAAAGGACAGAAATCTGGAACAACAGTAACCTTTGTGATTATAGAAGGATGGGTTGTTACAGTTGCATCTGTTGGTGATTCCCGTTGCATACTTGAACCTTCTGAAGGTGGGATATATTACTTGTCAGCAGATCATAGGCTAGAAACAAATGAAGAGGAGAGGGTGCGTATTACTGCTAGTGGGGGTGAGGTTGGTCGGCTAAATACTGGTGGAGGTGCAGAGATTGGTCCTTTGAGGTGTTGGCCTGGTGGCTTGTGTCTTTCACGATCCATTGGTGATATGGATATTGGTGAATATATTGTACCTGTACCATACGTAAAGCAAGTGAAGCTGTCCTCAGCTGGAGGCCGGCTTATTATCTGTAGTGATGGTGTTTGGGATGCTCTATCTGCTGAAGTGGCTCTTGACTGTTGTCGTGGCATGGCCGCAGACGTTGCAGCATCACATCTTGTCAAAGAAGCTTTGCAAGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTATTGATATATTACCTCAGGAAAAGCCTCCTGCTCCTGCACAACAACCTAAAAAACCGGGGAAAATGTTAAGAGCCATGTTTCGCAGGAAGTCTTCTGAATCTTCTTCTTGTAATGACAAAGACTACGTGGAGCCAGATATAGTAGAGGAACTGTACGAGGAAGGATCTGCTATGCTATCAgagagGTTAGATACAAAATATCCTCTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTGTGTCAAATGGAGATGAAACCCGGAGAGGGAATTTCAATCCATGCAGGTTTATCCAACCCAGGAAAATTGCGTCCCTGGGATGGACCTTTCCTTTGCTCAAGTTGccaagagaagaaagaagcaaTGGAGGGGAAAAGAACTTCAGACATAGCAGTGGAAGTGACTGACGAGTTCTCATGTAATTTGCATTTTGAGAGTGCTAAAGATGGTTTATATAACAGCATGGTCAAACCTCCAAGCAACCGTGATTCCCTTCTATTATCATGA 1377 0.4277 MTTRGEHQTIPLSVLLKRELANEKIEKPEIVHGQASQSKKGEDFTLLKTECQRVVGDGVSTYSVFALFDGHNGSAAAIYSKENLLNNILSAVPPDLNRDEWVSALPRALVAGFVKTDKDFQEKGQKSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGIYYLSADHRLETNEEERVRITASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDIGEYIVPVPYVKQVKLSSAGGRLIICSDGVWDALSAEVALDCCRGMAADVAASHLVKEALQAKGLRDDTTCIVIDILPQEKPPAPAQQPKKPGKMLRAMFRRKSSESSSCNDKDYVEPDIVEELYEEGSAMLSERLDTKYPLCNMFKLFMCAVCQMEMKPGEGISIHAGLSNPGKLRPWDGPFLCSSCQEKKEAMEGKRTSDIAVEVTDEFSCNLHFESAKDGLYNSMVKPPSNRDSLLLS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1202 458 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Sto5g1202 458 CDD PP2Cc 39 293 IPR001932 -
Sto5g1202 458 SMART PP2C_4 21 291 IPR001932 -
Sto5g1202 458 SMART PP2C_SIG_2 46 293 IPR001932 -
Sto5g1202 458 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Sto5g1202 458 Pfam Protein phosphatase 2C 53 278 IPR001932 -
Sto5g1202 458 PANTHER ALPHABET, ISOFORM E-RELATED 2 420 - -
Sto5g1202 458 Gene3D - 31 299 IPR036457 -
Sto5g1202 458 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1202 Sto-Chr5 8100874 8105083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1202 1 418 PP2C-type Phosphatase Gene Family AT1G47380 80.191 0.0 719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1202 5 8100874 8105083 Sto9g3563 9 34549812 34553528 CCT
Sto5g1202 5 8100874 8105083 Sto5g1202 5 8100874 8105083 ECH