Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1199 ATGGAGGTTTCTCAGACTTCTCAGCAAAAAAATTGTTCTCATCCCAGCGTCAGCGAGTGTAATATAGCAGATGTTGAAGACCAATTAGCATTGTCAAAACCTCAAACAGTCAATGTGGATCTTGGACTCTGTTCAGCTGAGAAAGCTGACTTAAACTGTGCTGTCACTATTTCTTCCTACAGCAGCCTGGGTAACCAAGCCTTGGAAGAGAAAGTTTTGAAGGTTGAAGATCTCTCAAGCACATTAACATCTCTGGATCCTGGAGATTGTGTCCTTAGAAAAAGAGCAACTATTACTCGATCAGCAAGTTCAGAGGACGAACAATTTCTTTTTAGTGACCTTGATGAATCCAGATGGAGTAATCAGCATGAGGGTTCAATCTCCCCTGAAGATGTAGACAGGGAAGATCAACTTTCTGACTTGGATGGTACTGAAAAAATATTAACAACGTCCACTCCCACGGATATCCCTAAAAATAAGGATGCTGGGGAGGAGGTCAATCAGATCACAAAATCCTTGCCTGGTGGTATGCATTCTCATGATAATGCCCTGGGCCAGCATCATCTTTGTTATCCTTTAAGTCATTCCTTCGACTCAAGGTCCCAAATGTTAAACAGCCCATTGCTTGGAAAAGATGACCTGGAATGTATAAAATCAGAAGACCAATTATTAACTGAAGAGCCAGGTGCCAAGGACAATAATGGTTCAGGTGAGTTCAAGAGTACTGCTTTGAATCCTTCCCTTGGTGGAAACTGGAGACTTTGGCCTTTCTCTTTCAGGAGATCAAAATCTGAAAAGGTTGAGCTGCCTGCACTTGATGTCGAAGATACTAATGCCGCTAAGAGCTCAGTCGACCCTGATACAGAAAACAACGAGCTCAAACCCACGCTATCGAAAAAGAATGTTAGGGCCATCACTCCAACATCTGAACAGCTGGCTTCATTGAATCTAAAGGAAGGGAAGAATACTGTAACCTTCACTTTCTCTACTAGTATGCTGGGGAAGCAACAGGTTGATGCCCAAATTTATTTGTGGAAATGGAACACTCGTATAGTAATATCAGACGTGGATGGGACAATTACACGGTCAGACGTTCTTGGTCAGTTCATGCCTTTGGTTGGAGTAGACTGGTCACAAACAGGTGTTGCGCATTTATTCTCAGCTATCAAGGAAAATGGTTACCAGTTGCTTTTTCTCAGTGCTCGTGCAATTTCTCAAGCCTATCACACCAGACAATTCTTAATTAACCTTAAGCAGGATGGGAAAGTTCTTCCAGATGGTCCTGTAGTTATTTCTCCTGATGGGCTTTTCCCCTCTCTATTTCGAGAAGtTATCAGGAGGGCCCCTCATGAGTTCAAGATTGCATGCCTAGAAGAAATCAAGGCACTTTTTCCTTCTGATTACAATCCATTTTATGCTGGCTTTGGAAATAGAGATACTGATGAGATTAGCTACCGTAAGGTTGGAATCCCAAAAGGAAAAATCTTCATTATTAATCCCAAGGGAGAGGTTGTTGTGAACCGGTGTCATGACGCAAAATCATATACTTCACTTCATGCTCTCGTGAATGGGATGTTCCCTCCTCCAGACTCATTTGAGCAGGAAGATTTTAATTCATGGAACTACTGGAAGCTACCTCCTCCTGGTATAGAACTATAG 1659 0.4237 MEVSQTSQQKNCSHPSVSECNIADVEDQLALSKPQTVNVDLGLCSAEKADLNCAVTISSYSSLGNQALEEKVLKVEDLSSTLTSLDPGDCVLRKRATITRSASSEDEQFLFSDLDESRWSNQHEGSISPEDVDREDQLSDLDGTEKILTTSTPTDIPKNKDAGEEVNQITKSLPGGMHSHDNALGQHHLCYPLSHSFDSRSQMLNSPLLGKDDLECIKSEDQLLTEEPGAKDNNGSGEFKSTALNPSLGGNWRLWPFSFRRSKSEKVELPALDVEDTNAAKSSVDPDTENNELKPTLSKKNVRAITPTSEQLASLNLKEGKNTVTFTFSTSMLGKQQVDAQIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARAISQAYHTRQFLINLKQDGKVLPDGPVVISPDGLFPSLFREVIRRAPHEFKIACLEEIKALFPSDYNPFYAGFGNRDTDEISYRKVGIPKGKIFIINPKGEVVVNRCHDAKSYTSLHALVNGMFPPPDSFEQEDFNSWNYWKLPPPGIEL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1199 552 MobiDBLite consensus disorder prediction 143 163 - -
Sto5g1199 552 MobiDBLite consensus disorder prediction 143 157 - -
Sto5g1199 552 Pfam LNS2 (Lipin/Ned1/Smp2) 305 527 IPR013209 -
Sto5g1199 552 SMART lns2 351 507 IPR031315 -
Sto5g1199 552 PANTHER LIPIN 161 551 IPR026058 -
Sto5g1199 552 PANTHER GH19076P 161 551 - -
Sto5g1199 552 SUPERFAMILY HAD-like 343 494 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1199 Sto-Chr5 8086643 8091882 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1199 5 8086643 8091882 Sto9g3560 9 34535806 34541550 CCT
Sto5g1199 5 8086643 8091882 Sto5g1199 5 8086643 8091882 ECH