Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1184 ATGGAAGGTTACGACCGGACTATGAGGCTTGGACCTCTGAACTTTAAGCATGATCGCAGTGAGTTTGATTCGGAGCCTGATGTATTCGTCTCTTCTCCGATTACCAGACAGAAGGCAGCTGCTGCCAAACAGTTTATAGAGAATCATTACAAGAATCATCTCCAAGGATTGCAGGATCGTAAAGAAAGACGTAGAGCACTCCAAAGGAGAGCACAAGAAGCTAAGATATCAGTTGAAGAACAGGAGGAAATGCTGAGGAATCTGGAGCGCCGGGAAACTGAATATATGTGGATGCAGAGACataaaataggaattgatgACTTTGATCAATTAACAGTAATTGGCAAAGGTGCTTTTGGTGAGGTGAGGCTATGTCGTTCTAAAAGTACTGGAGAGGTTTTTGCcatgaagaaattgaagaaatcagAGATGCTTAGCCGTGGACAGGTAGAACATGTTCGTTCTGAGAGGAACTTGCTGGCAGAGGTTGATAGTCGATGCATTGTAAAACTCCATTACTCGTTCCAAGATTCAGATTTCCTATATCTCATCATGGAGTATTTACCTGGGGGTGACATTATGACATTATTAATGAGAGAAGATATTCTTTCTGAAGATGTTGCCCGCTTTTACATTGCAGAAAGCATTCTAGCTATCCACTCAATACATCAACACAACTATGTGCATAGGGATATAAAACCAGATAACCTTATACTGGATAGAAATGGCCACTTGAAGCTTTCAGACTTCGGCCTATGTAAGCCTCTTGATGACAAgtattcaacaatttttttgggAAATGAAGATTTCAATCATGAATCAGCTAGTGAAACTGAAGATTATTCAGCTTCTCCCCGCTTGATGTCAAAAGAGCAATTCCTGCAGTGGAAACTTCTTCAGGCATATTCAACCGTTGGAACTCTTGATTATATGGCACCTGAAATTTTGCTCAAAAAGGGTTATGGAATGGAATGTGATTGGTGGTCTCTTGGGGCAATCATGTATGAGATGCTTATCGGCTATCCTCCCTTCTGTTCGGAGGATCCAAGGATGACATGCCCTGAAGCTAAGGATTTGATCTGTCACTTACTGTGTGATGTTGACACAAGGCTAGGGACTAGAGGAGTTGAAGAAATAAAGACACATCCATGGTTCAGATGCGTCCCGTGGGACATGCTTTATGAAATGGAAGCTGCATATAGACCTAAAGTCACTGGAGACTTGGATAcacaaaactttgagaagtttcCAGAAGTAGAAGGTCCACCATCCTCAACAGAAACTGTGGGACGTTGGCGGAAGATGTTGACATCCAAAGACACCAACTTCATAGGATATACTTACAAGAAATCAGACCTTAGATCACTTAATGGATCAGGCACAGATGCCAGATTAAACGGATCATCAAACACTCCTTCATTAATTTCCTTGTTAGGTCGGATTGACTTGCAAGAAACTATCATTCCAGAAAGTGAGAAGAAGCAAGAAAGTtga 1494 0.3976 MEGYDRTMRLGPLNFKHDRSEFDSEPDVFVSSPITRQKAAAAKQFIENHYKNHLQGLQDRKERRRALQRRAQEAKISVEEQEEMLRNLERRETEYMWMQRHKIGIDDFDQLTVIGKGAFGEVRLCRSKSTGEVFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDRNGHLKLSDFGLCKPLDDKYSTIFLGNEDFNHESASETEDYSASPRLMSKEQFLQWKLLQAYSTVGTLDYMAPEILLKKGYGMECDWWSLGAIMYEMLIGYPPFCSEDPRMTCPEAKDLICHLLCDVDTRLGTRGVEEIKTHPWFRCVPWDMLYEMEAAYRPKVTGDLDTQNFEKFPEVEGPPSSTETVGRWRKMLTSKDTNFIGYTYKKSDLRSLNGSGTDARLNGSSNTPSLISLLGRIDLQETIIPESEKKQES 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1184 497 SMART pkinase_C_6 386 450 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto5g1184 497 Coils Coil 57 91 - -
Sto5g1184 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Sto5g1184 497 Pfam Protein kinase C terminal domain 404 448 IPR017892 GO:0004674|GO:0005524|GO:0006468
Sto5g1184 497 SMART serkin_6 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1184 497 Gene3D Phosphorylase Kinase; domain 1 105 420 - -
Sto5g1184 497 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 353 - -
Sto5g1184 497 PANTHER SERINE/THREONINE-PROTEIN KINASE 355 483 - -
Sto5g1184 497 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 355 483 - -
Sto5g1184 497 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 353 - -
Sto5g1184 497 CDD STKc_NDR_like 106 449 - -
Sto5g1184 497 SUPERFAMILY Protein kinase-like (PK-like) 83 435 IPR011009 -
Sto5g1184 497 ProSiteProfiles Protein kinase domain profile. 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g1184 497 Gene3D Transferase(Phosphotransferase) domain 1 188 402 - -
Sto5g1184 497 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Sto5g1184 497 ProSiteProfiles AGC-kinase C-terminal domain profile. 386 458 IPR000961 GO:0004674|GO:0005524|GO:0006468
Sto5g1184 497 Pfam Protein kinase domain 109 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1184 Sto-Chr5 7968711 7975641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1184 1 485 AGC Kinase Gene Family AT5G09890 72.070 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Sto5g1184 Pkinase 8.5e-58 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1184 5 7968711 7975641 Sto5g1184 5 7968711 7975641 ECH