Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1169 ATGGGAGAGCCTCAGAGTCCGTCTCAGTGCGCCTCACTCCCACCCGGTTGCCGATTCTACCCTTCCGAAGAGCAGCTTCTTTGCTATTACTTAACCAACAAAAACTCCAGGTTGAACAAGGAAGGTAATTTTTGTGGCTGCGATTTGATCAGAGAGATTGACCTGTACGATCACGATCCTTCTGAATTGCCTGACGTCGCGTCCTTTTCCTATGGTTATCGGGGAAGAAAGAGGCATTGGTACTATTATACGGTCAAGTCTGTGAAGGGGTCTCGACGGAAGATTAGGAAGGTCAAAAGTGGATATTGGATGAGACAGGGAAGGGCTAGAGATGTTTTGAGTAGTGGTGGGAAGGTGGTTTTGGGGAAGAGAACGAGTTTCGTTTTCTATTCGGGGAATTCGTCAGAAAGTGCGGTTAGGACGGATTGGATGTTATATGAATATGCTTTAATTGACCATGTTAAGGCCTCTTTTGTCCTTTGTCGTGTATTTGCTAGGCCATGTTGTAGGAATGGTGTATCAGAGATTGGCCCTAGTTCTTGGGTAGAAGAAAGTGTCTCAGCAGTACGCCACATTGGCATTCAGCATGATGAATTTGTTACACCTGATGCTGTTGAGGCTAAAGTATTTGATGAAAGGTCTATTGACAGAAAACAGGAGATTTCACTATATCCACTAAGATGTGCAGGCAAACTAGATGGTCACCAGGTCCTGACTGCACCCGTTTCTGCTGCTACTTTCCAATGTTCTGTGGATCCTCAGGGCAGTTGGaagGAAAGGTCTTCTGTACATTGTGGTGGTGCTGGAATGTTTGTTGAAGCTGTGACATCTCAGCAACATCTATATTCCATTCTAGAGGAGGATTTCATAGAGTTGGATGATCTCACATGA 891 0.4501 MGEPQSPSQCASLPPGCRFYPSEEQLLCYYLTNKNSRLNKEGNFCGCDLIREIDLYDHDPSELPDVASFSYGYRGRKRHWYYYTVKSVKGSRRKIRKVKSGYWMRQGRARDVLSSGGKVVLGKRTSFVFYSGNSSESAVRTDWMLYEYALIDHVKASFVLCRVFARPCCRNGVSEIGPSSWVEESVSAVRHIGIQHDEFVTPDAVEAKVFDERSIDRKQEISLYPLRCAGKLDGHQVLTAPVSAATFQCSVDPQGSWKERSSVHCGGAGMFVEAVTSQQHLYSILEEDFIELDDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1169 296 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 295 - -
Sto5g1169 296 SUPERFAMILY NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Sto5g1169 296 ProSiteProfiles NAC domain profile. 13 166 IPR003441 GO:0003677|GO:0006355
Sto5g1169 296 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 10 295 - -
Sto5g1169 296 Pfam No apical meristem (NAM) protein 14 150 IPR003441 GO:0003677|GO:0006355
Sto5g1169 296 Gene3D NAC domain 22 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1169 Sto-Chr5 7848079 7850522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1169 13 176 NAC Transcription Factor Family AT1G76420 34.302 6.35e-24 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto5g1169 NAM 3.6e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1169 5 7848079 7850522 Sto5g1169 5 7848079 7850522 ECH