Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1167 ATGAGGAAGTGGGGAAAGTGGGTGGCTGAGATCAGAGAACCCAATAAGAGGTCCAGGATCTGGCTGGGTTCATACACCACTCCCGTGGCGGCGGCAAGAGCATACGACACCGCCGTTTTCTATCTGCGAGGGCCCTCCGCTCGCCTTAACTTCCCGGAGCTCTTATTCCAAGACGACCACGTGCAAGGCCACATGTCAGCCGATTCCATACGCAAGAAAGCCACGGAAGTCGGGGCCAGAGTGGACGCCCTCCAAACCGCTCTTCatgcctcctcctcctccactaCTAATTCTGCTTCTTCCCAAACCGCCTCCCTCAAACCCGACTTGAATGATTGTGAAAACTGGGAACAACTGAACCAGAAACGATAG 372 0.5188 MRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQDDHVQGHMSADSIRKKATEVGARVDALQTALHASSSSTTNSASSQTASLKPDLNDCENWEQLNQKR 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1167 123 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 1 117 - -
Sto5g1167 123 MobiDBLite consensus disorder prediction 88 109 - -
Sto5g1167 123 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Sto5g1167 123 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
Sto5g1167 123 SUPERFAMILY DNA-binding domain 2 53 IPR016177 GO:0003677
Sto5g1167 123 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Sto5g1167 123 Pfam AP2 domain 2 44 IPR001471 GO:0003700|GO:0006355
Sto5g1167 123 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Sto5g1167 123 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 1 117 - -
Sto5g1167 123 MobiDBLite consensus disorder prediction 88 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1167 Sto-Chr5 7819132 7821226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1167 1 89 AP2-EREBP Transcription Factor Family AT5G67190 78.652 9.55e-46 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto5g1167 AP2 5e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1167 5 7819132 7821226 Sto5g1167 5 7819132 7821226 ECH