Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1164 ATGGCCTCAACTGTCCAGAATATTCTAAACACTACATTAGAATGGGTGACATTGGCTTTGGATGCTCCTTCTGCTCGAGCAGTAGTTTTTGGAGTGCATATTGGCGGACATTTATTTGTTGAAGTTGTTCTCCTGGTGGTcattcttttccttctctcCCAGAAAAGTTACAAGCCTCCAAAACGACCCTTGAGAGAGAAGGAAATAGATGAGCTATGTGAAGAATGGGTTCCAGAGTCCCTGATTCCTCCGCTAAGTAAAGAGATGCAGCATGAAACACCAGTGCTGGAGAGTGCTGCTGGGCCACATGCCATTATTAATGGTAAAGAAGTTATTAATTTTGCTTCGGCAAACTATCTCGGATTGATAGGTCATGAGAAGCTACTTGAGTCATGTTCTTCTTCTTTAGGGAAATATGGTGTTGGTTCTTGTGGTCCTCGTGGATTCTATGGAACAATTGATGTCCACCTTGACTGTGAAGCAAGAATAGCAAAATTTTTGGGAACCCATGATTCAATTCTTTATTCTTACGGTCTTTCAACCATGTTTAGTGCAATTCCTGCTTTCTCTAAGAAAGGAGATATAATCGTTGTATTTCAGTATACTGCAAGACTGGATGAGGGAGTCCACTGGGGGATACAAAATGGCCTCTATCTTTCTAGAAGCACAGTGGTGTATTTTAAGCACAATGACATGAACTCTTTAAGAGAAACTCTGGAGAAAATCACTGCAGAAAATAAACGGGCCAAGAAATTGAGGCGGTACATCGTTGTTGAAGCTGTCTACCAGAATTCTGGACAAATTGCACCCCTAGATGAGATCATTAGACTGAAGGAGAAATACCATTTTCGTGTTTTGTTGGATGAGAGCAACTCATTAGGTGTGCTTGGAAGCTCAGGAAGGGGTCTCACTGAATACTTCGGAGTTCCAGTTGAGAAGTTAGATATCATAACTGCTGCTATGGGACATGCGCTGGCCACAGAAGGGGGATTCTGCACCGGAAGTGCTAGAGTTATAGATCACCAACGATTGAGTAGCTCTGGCTATGTCTTTTCTGCATCTCTGCCCCCATATCTTGCGAGCGCTGCAATTACAGCTATTGACATCCTTGAGGAAAATCCCAATCTGATTACAAAGCTAAAGAATAACATTGCTGTGCTGTGGAAAGAACATCTGAAGTGCTTATTATCACTATTAGAATTTAGAACAATGATCTTTTCTCATTCAAAAATGAATTGGGCTTCTGCAGGATTATCAAACGTACCAGGCTTGACAATAGCAAGTAATGTGGAATCACCAATTGTTTATTTGAGATTAGAGAAGTCAACGGGTTCTATGAAAAATGACCTACGCCTGCTCGAAGATATAGCTGATCGTGTTTTGAAGGAAGATTCTGTATGTGTGGTGGCTTCCAAAAGATCAACTCTGGACAAATGCCGTTTGCCTGTAGGAATTAGATTATTTGTTTCGGCGGCTCATTCAGAGTCCGATCTCCGTAAAGCAGCTGAATCTTTGAAAAGGGTTGCGGCCTTAGTCCTGACTGATCatacttga 1554 0.4125 MASTVQNILNTTLEWVTLALDAPSARAVVFGVHIGGHLFVEVVLLVVILFLLSQKSYKPPKRPLREKEIDELCEEWVPESLIPPLSKEMQHETPVLESAAGPHAIINGKEVINFASANYLGLIGHEKLLESCSSSLGKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTHDSILYSYGLSTMFSAIPAFSKKGDIIVVFQYTARLDEGVHWGIQNGLYLSRSTVVYFKHNDMNSLRETLEKITAENKRAKKLRRYIVVEAVYQNSGQIAPLDEIIRLKEKYHFRVLLDESNSLGVLGSSGRGLTEYFGVPVEKLDIITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDILEENPNLITKLKNNIAVLWKEHLKCLLSLLEFRTMIFSHSKMNWASAGLSNVPGLTIASNVESPIVYLRLEKSTGSMKNDLRLLEDIADRVLKEDSVCVVASKRSTLDKCRLPVGIRLFVSAAHSESDLRKAAESLKRVAALVLTDHT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1164 517 Coils Coil 232 252 - -
Sto5g1164 517 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 3 390 - -
Sto5g1164 517 PANTHER LONG CHAIN BASE BIOSYNTHESIS PROTEIN 1-LIKE 412 516 - -
Sto5g1164 517 SUPERFAMILY PLP-dependent transferases 80 509 IPR015424 -
Sto5g1164 517 Pfam Aminotransferase class I and II 110 505 IPR004839 GO:0009058|GO:0030170
Sto5g1164 517 Gene3D - 125 373 IPR015421 GO:0003824
Sto5g1164 517 Gene3D Aspartate Aminotransferase, domain 1 104 503 IPR015422 GO:0003824
Sto5g1164 517 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 3 390 - -
Sto5g1164 517 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 412 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1164 Sto-Chr5 7787543 7793271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1164 1 342 Acyl Lipid Metabolism Gene Families AT4G36480 74.854 0.0 546