Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1162 ATGGAAGCAGGGGAGGATTGTTGTGTCAAGGTTGCGGTCCATGTCCGACCGCTCATCAGTGATGAGAAGCTTCAAGGGTGTAAAGATTGTGTCACCGTCGTCCCTGGGAAGCCTCAGGTGCAAATTGGGGCTCATTCCTTTACATTCGATCATGTTTATGGGAGCACTGGTTCTCCTTCATCTGCTATGTTTCAAGAATGTGTTGCTCCCCTTGTTGATGGTTTATTCCAAGGATATAATGCTACTGTTCTCGCATATGGTCAGACAGGTTCGGGGAAAACATATACCATGGGAACTGGTTTCAAAGATGGTTTCCAAATAGGCATTATACCACAAGttatgaatattttgttcaataAAATTGAAGCCTTAAAGCATCAGATTGAATTTCAGTTGCATGTTTCCTTCATTGAGaTTCTTAAAGAAGAAGTACGAGACTTGCTGGATTCCTCTTCAATGAGCAAACCAGAAACTGCAAATGGACATGCAGGAAAAGTGACTGTTCCTGGGAAACCTCCAATACAAATTCGTGAAACATCAAATGGTGTAATTACCCTAGCTGGATCTACTGAAGTCAGCGTTTCAACACTAAAAGAGATGGCTGCTTGTTTGGAACAAGGATCATTGAGCAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGTCGTTCGCATGCCATCTTCACCATCACATTAGAGCAAATGCGCAAGATGAATCCTGCTATTCCTAGTGAGAACAGTTTAAATGAGTCCATGAATGAAGAGTACCTTTGTGCCAAGTTGCACTTAGTGGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGCTCTGATGGTTTGCGCTTTAAGGAAGGAGTTCACATTAACAAGGGCCTCCTAGCACTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTTGGTGGTAACAGCCGAACTGTTATGATAGcTTGCATAAGTCCTGCTGATATTAATGCTGAggaaaccttgaacactttgaAGTATGCGAATCGTGCACGCAACATCCAAAATAAACCTGTTatcaaccGAGATCCCATGTCCAATGAGATGTTGAAAATGAGACAACAACTAGAGTATTTACAAGCAGAACTTTGTGCTCGTGCTGGTGGCTCTTCCGAGGAAGTTCAGgTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAGGATCTTTGCCGTGAACTTCATGAATACCGCAGTAGATGTTCTGTTGTAGAACAATGTGAAAAGGATTCTCATgATGGTAGCACATGCATTGTGAAGACTGATGGCCTTAAGAGGGGCTTCCCTATCATAGCATCTGATTATCCAATGAATGAAACGACAGGAGATGCACGGGAAATTGAAGAAGTAGCAAAAGAGTGGGAGCACACTCTTCTGCAAAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAGCACCTGATGCTGAAACACTCAAGCAGCACTTTGGAAGGAAAATAATGGAGTTGGAGGACGAGAAGAGAACCGTCCAGCGAGAGAGGGATCATCTTTTAGCTGAGGTTGAAAATCTCTCTGCCAGTTCTGATGGGCAAACACAGAAATTAGAGGATATCCATGCCCAAAAGTTGAAATCACTTGAAGCTCAGATTCTGGATCTGAAGAAGAAACAAGAGAGCCAGGTCCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCGGCAAAGAGACTGCAAGATGAAATACAATCTATAAAGGCTCAGAAGGTCCAATTGCAACAAAGGATAAAACAAGAGGCGGAACAATTTCGGCAATGGAAGGCTTCTAGAGAGAAAGAACTCCTGCAAGTACTTCAAAGAAAGACTGAAGAAGCTGCAATGGCCACCAAGAGGCTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCAACCGAGACACTTCAGCTATTAGCAATGGAAATGGAACAAATGGGCAGAGCAATGAGAAATCCTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGGTGAAAGAGCATGAAGTACGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCCCTTGCGGAAGAGTTAGCCATGCTGAAGCAAGTGAATGAATTTGTTGCAAAGGGCCTCAGTCCTCCTAGAGGAAAGAATGGATTTGCGAGAGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCGTCACTTGAGAACATGCTAAGCATATCATCTAATTCACTAGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGCGCCTTTACTAATCGCGGACGCTGGAACCAGTTGCGTTCAATGGGAGAAGCCAAAAATTTGCTTCAATATATGTTTAATTCTGCTGCAGACGCTAGTTCAATGCTAGATTGCTTTGAATTGCCTTATGTTCTCCCTGGAGATCagaatatttttcttttgagGTGCCAGCTGTGGGAAAAGGACATGGAAATCAGGGAAATGAAAGATCAAATCAAAGAACTCGTAGGCCTATTAAGGCAGAGTGAGATCAAGAGAAAGGAAGCTGAGAAGGAGCTAAAACTGAGGGACCAAGCTGTTGCAACCACATTGGCTACGCCAGCTTCTGGAAACTCGCCAAATTCATTAAAACATTATGCTGAAGATATGAATCGACCTCTATCTCCAGTGTCTGTGCCCGTGCAAAAACAGCTCAAGTATACCCCTGGAATTGTCAATGGCTTAGCGAGAGAATCAGCGGCATTTATAGATCAGAGTAGGAAGATGGTACCCATCAAGCAGCTATCAATGAAAAAACTAGAAATTGTTGGACAAGCTTCTGGAAAGCTATGGAGGTGGAAAAGAAGTCATCACCAGTGGTTAGTACAATTCAAGTGGAAGTGGCAGAAGCCATGGAGGCTATCAGAATGGATCCGTCACAGTGATGAGACAATCATGAGAGCAAAGCCGCGTCCACGGGCTTTGCCACCATCTAGTGAGGTTTGTTGCAATGTTGCCAGCAGTGACCCAAATAATTACCTGAGGAGGAGGCAGGCTGAGCTTGAGCAATTGCACACTCAGCAAACAAAGAAGCCAGTTGATCAACAGCAGCATTTTCTTGCAGTCTACTTCTATACAGCTCACGGGCATGATGTAGGGAACGAAAAACTGCTTCATCCCCACCTTTGGTCTTCATTGCTACAACCACCTGTTCCAAAATATCCTAAATGCAGCATTGCAAAGTTAAAGAACCTTAAAGGGGGCACACCAGGTGTCTATAAGGAGGGACCAGGGGAGGCAGACCCCAGGCAAGACCTCCTAGAGGCAGGAACTGAGGCGTTGGGGGagaatgattaa 3444 0.4323 MEAGEDCCVKVAVHVRPLISDEKLQGCKDCVTVVPGKPQVQIGAHSFTFDHVYGSTGSPSSAMFQECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGFQIGIIPQVMNILFNKIEALKHQIEFQLHVSFIEILKEEVRDLLDSSSMSKPETANGHAGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKMNPAIPSENSLNESMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSRCSVVEQCEKDSHDGSTCIVKTDGLKRGFPIIASDYPMNETTGDAREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKESEMKLFGAPDAETLKQHFGRKIMELEDEKRTVQRERDHLLAEVENLSASSDGQTQKLEDIHAQKLKSLEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQVLQRKTEEAAMATKRLKELLEARKSSNRDTSAISNGNGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFVAKGLSPPRGKNGFARASSMSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSAADASSMLDCFELPYVLPGDQNIFLLRCQLWEKDMEIREMKDQIKELVGLLRQSEIKRKEAEKELKLRDQAVATTLATPASGNSPNSLKHYAEDMNRPLSPVSVPVQKQLKYTPGIVNGLARESAAFIDQSRKMVPIKQLSMKKLEIVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETIMRAKPRPRALPPSSEVCCNVASSDPNNYLRRRQAELEQLHTQQTKKPVDQQQHFLAVYFYTAHGHDVGNEKLLHPHLWSSLLQPPVPKYPKCSIAKLKNLKGGTPGVYKEGPGEADPRQDLLEAGTEALGEND 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1162 1147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 395 IPR027417 -
Sto5g1162 1147 MobiDBLite consensus disorder prediction 667 693 - -
Sto5g1162 1147 Coils Coil 649 669 - -
Sto5g1162 1147 Coils Coil 568 640 - -
Sto5g1162 1147 Coils Coil 492 512 - -
Sto5g1162 1147 Pfam Kinesin motor domain 16 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1162 1147 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Sto5g1162 1147 Coils Coil 861 895 - -
Sto5g1162 1147 Gene3D Kinesin motor domain 2 393 IPR036961 -
Sto5g1162 1147 MobiDBLite consensus disorder prediction 1115 1147 - -
Sto5g1162 1147 CDD KISc_KIF4 7 366 - -
Sto5g1162 1147 Coils Coil 405 425 - -
Sto5g1162 1147 MobiDBLite consensus disorder prediction 152 174 - -
Sto5g1162 1147 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1162 1147 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 648 - -
Sto5g1162 1147 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 648 1025 - -
Sto5g1162 1147 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1162 1147 Coils Coil 525 559 - -
Sto5g1162 1147 MobiDBLite consensus disorder prediction 673 693 - -
Sto5g1162 1147 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1162 1147 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1162 1147 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1162 1147 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sto5g1162 1147 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 648 - -
Sto5g1162 1147 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 648 1025 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1162 Sto-Chr5 7764907 7778917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1162 9 404 Calmodulin-binding Proteins AT5G65930 33.000 1.96e-51 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1162 5 7764907 7778917 Sto5g1162 5 7764907 7778917 ECH