Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1158 ATGGGTTCGTATAGATTGTTTCCTGCGATGATCATGGTAGTACTATTCACCCTCCTCACTCTTTCATCGGCCCTGGACATGTCCATCATCTCCTACGACAAAACTCACGCACAGTGGAGGACGGACGAGGAGGTGATGGCCATATACGAACAGTGGCTTCTACAACACGGCAAGGCATATAACGGTTTGGGGGAGAAAGAGAAGAGGTTCGAGATCTTCAAGGATAATCTCAGGTACATCGATGAGCACAACGCGGAGGGTCGCGCCTATAAGTTGGGCTTGAACCGGTTCGCCGATCTAACCAACGACGAGTACCGGTCCAAGTACTTGGGAACCAGGATTGATCCCAAGAGGAGGATCGCTAAGACCAGGAGCAATCGTTACGCTCCACGCGTCGGCCAGAAATTACCCGATTCCATTGATTGGAGGAAGGAAGGTGCCGTTGCTGAGGTCAAAGACCAAGGAAGTTGCGGGAGCTGCTGGGCATTTTCAACCATCGCTGCAGTGGAaggaataaataaaatagtGACTGGAGATCTAATTTCACTATCAGAGCAAGAGCTGGTGGACTGTGATACATCTTATAACGAAGGATGCAATGGTGGGCTCATGGACTACGCGTTTGAGTTTATCATCAAGAACGGTGGCATTGACTCCGAAAAGGATTACCCCTACAAGGGTCTTGGTTCTAGATGTGACACATACAGGAAAAATAAAGCTAAAGTCGTCGCCATTGATGGCTACGAGGATGTTCCTGCCAACGATGAGGACGCTTTGAAAAATGCTGTCGCAAATCAGCCAGTGAGCATTGCCATTGAAGGTGGTGGGAGGGACTTCCAGTTATATGATTCCGGTGTATTTACGGGAAGTTGCGGGACATCATTAGACCATGGTGTGACTGCTGTTGGATATGGTTCAGAAAATGGTCTTGATTATTGGATTGTGAAGAACTCATGGGGTAGCAGCTGGGGAGAAAGGGGGTATATCAGAATGCAACGTAATATCGGCAATTCCAAAACTGGAATGTGTGGAATTGCAATGGAAGCTTCGTACCCCATCAAGGAAGGCCCAAATCCACCCAATCCTGGCCCATCACCCCCTTCACCTGTGAGGCCACCAACTGTTTGTGATAATTACTACAGCTGTGAAGAGAGCACTACTTGCTGCTGTGTCTATGATTTTGGAAATTACTGCTTTGCCTGGGGATGCTGTCCTCTAGAAGCTGCCACGTGCTGTGAAGACCACTACAGTTGCTGCCCTCATGACTATCCCATTTGCAACATTGAACAAGGAACCTGTCTAATGAGCAAGAACAATCCCTTTGGAGTGAAGGCAATGAAGCGTACTCCAGCTAAACCCTACTGGGCTTTTGGAGCTAAGAAGAAGCAGAGCAGTGCTTGA 1401 0.4797 MGSYRLFPAMIMVVLFTLLTLSSALDMSIISYDKTHAQWRTDEEVMAIYEQWLLQHGKAYNGLGEKEKRFEIFKDNLRYIDEHNAEGRAYKLGLNRFADLTNDEYRSKYLGTRIDPKRRIAKTRSNRYAPRVGQKLPDSIDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDSEKDYPYKGLGSRCDTYRKNKAKVVAIDGYEDVPANDEDALKNAVANQPVSIAIEGGGRDFQLYDSGVFTGSCGTSLDHGVTAVGYGSENGLDYWIVKNSWGSSWGERGYIRMQRNIGNSKTGMCGIAMEASYPIKEGPNPPNPGPSPPSPVRPPTVCDNYYSCEESTTCCCVYDFGNYCFAWGCCPLEAATCCEDHYSCCPHDYPICNIEQGTCLMSKNNPFGVKAMKRTPAKPYWAFGAKKKQSSA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1158 466 SMART pept_c1 136 353 IPR000668 GO:0006508|GO:0008234
Sto5g1158 466 PRINTS Papain cysteine protease (C1) family signature 154 169 IPR000668 GO:0006508|GO:0008234
Sto5g1158 466 PRINTS Papain cysteine protease (C1) family signature 297 307 IPR000668 GO:0006508|GO:0008234
Sto5g1158 466 PRINTS Papain cysteine protease (C1) family signature 312 318 IPR000668 GO:0006508|GO:0008234
Sto5g1158 466 SMART GRAN_2 376 433 IPR000118 -
Sto5g1158 466 SUPERFAMILY Granulin repeat 373 407 - -
Sto5g1158 466 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 382 - -
Sto5g1158 466 Pfam Cathepsin propeptide inhibitor domain (I29) 49 105 IPR013201 -
Sto5g1158 466 SUPERFAMILY Cysteine proteinases 40 353 IPR038765 -
Sto5g1158 466 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 312 331 IPR025661 -
Sto5g1158 466 Gene3D Granulin 373 436 IPR037277 -
Sto5g1158 466 Gene3D Cysteine proteinases 22 355 - -
Sto5g1158 466 CDD Peptidase_C1A 137 352 IPR039417 -
Sto5g1158 466 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 154 165 IPR000169 -
Sto5g1158 466 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 295 305 IPR025660 -
Sto5g1158 466 SMART Inhibitor_I29_2 49 105 IPR013201 -
Sto5g1158 466 Pfam Papain family cysteine protease 136 353 IPR000668 GO:0006508|GO:0008234
Sto5g1158 466 Pfam Granulin 387 434 IPR000118 -
Sto5g1158 466 PANTHER CYSTEINE PROTEASE 30 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1158 Sto-Chr5 7742068 7745206 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1158 5 7742068 7745206 Sto9g3529 9 34373292 34376188 CCT
Sto5g1158 5 7742068 7745206 Sto2g0564 2 4789362 4791689 ECH
Sto5g1158 5 7742068 7745206 Sto5g1158 5 7742068 7745206 ECH