Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1157 ATGGAATATCTAGGGATTGATCTGAGCTGTGCTGTGGGATCTCTACGCCATGGCAAGTTCCCTGACAAGGACTGTTTGCTACCTCTCATTTCGAAACTCCTCGGCTATGCCATCGTCGCTGCTTCTACCACCGTCAAAGTTCCCCAGATTCTAAAAATTTTGCAACATAAAAGTGTAAGAGGACTAAGCATGATATCCTTTGAGCTTGAAGCTGTTGGCTATACCATAGCACTAGGTTACTGTCTTCACAAAGGGATTCCATTTTCAGCTTACGGAGAGCTATTATTTCTATTAATCCAAGCTTTAGTTTTGGTTGCTGTAATATACTACTATTCTCAACCAGTGGGTACCAAGACATGGATCCGAGCATTGCTATATTGTGCTTTAGCGCCCACTATTTTAGCCGGTCAAATTGAACCTCTCCTCTTTGAAGCTTTGTATGCATCCCAGCATGCTATTTTTCTCTTCGCTAGGATCCCACAGATATGGAAAAACTTTTCTAACAAAAGTACGGGGGAGCTCAGCTTTTTGACATGTTTCATGAATGTTGGAGGCTCAATGGTTAGAGTCTTCACCAGCATTCAAGAAAATGCACCAAAAAGTGTATTGATGGGCTCTGTAATTAGTGTTGCAACAAATTTTACCATCTTAAGTCAGATAATATTGTACCAGAGGCCACCGGctagtaaagaaaagaaaatgaagtaa 708 0.4025 MEYLGIDLSCAVGSLRHGKFPDKDCLLPLISKLLGYAIVAASTTVKVPQILKILQHKSVRGLSMISFELEAVGYTIALGYCLHKGIPFSAYGELLFLLIQALVLVAVIYYYSQPVGTKTWIRALLYCALAPTILAGQIEPLLFEALYASQHAIFLFARIPQIWKNFSNKSTGELSFLTCFMNVGGSMVRVFTSIQENAPKSVLMGSVISVATNFTILSQIILYQRPPASKEKKMK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1157 235 Gene3D - 150 234 - -
Sto5g1157 235 SMART ctns 44 75 IPR006603 -
Sto5g1157 235 SMART ctns 156 187 IPR006603 -
Sto5g1157 235 Pfam PQ loop repeat 30 89 IPR006603 -
Sto5g1157 235 Pfam PQ loop repeat 151 201 IPR006603 -
Sto5g1157 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 2 225 IPR016817 -
Sto5g1157 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 2 225 - -
Sto5g1157 235 PIRSF Mpdu1 6 235 IPR016817 -
Sto5g1157 235 Gene3D - 29 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1157 Sto-Chr5 7737465 7740983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1157 1 223 Miscellaneous Gene Families AT4G07390 76.682 3.19e-129 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1157 5 7737465 7740983 Sto5g1157 5 7737465 7740983 ECH