Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1156 ATGGGCCAAGCTTCTTCGACGGCTGCAATCCCTTGCCGTCGCGAAACCATTCGCACCCAACGCTCCAGCTCAAAATCCAGATCAACGCACGTCGTTTCACCCATGCTTCCCGGTGAAAACCACGAGTCTCCTCTTGAGGTCATCCATGAAGACGCCGACTATATCTCTCATCTTCCCGACGAGTGCTTGGCTTGCATTTTCCAGTCACTTGGCTCAGCCGACCGCAACCGCTGCTCCCTAGTATGCCGGCGGTGGCTCCAGATCGAGGGACAGAGTCGTCACCGTCTCTCCCTCAACGCTCAATCAGATCTTCTCCCGGTTGTCCCTTCTATTTTCTCGCGATTCGATTCCGTCACGAAGCTCGCTTTGAAATGCGACCGCAGATCCGTCAGCATTGGGGACGAAGCGCTTGTCCTTATATCTCAGCGATGCCCTAATTTGACTCGCTTGAAACTCCGTGCCTGCCGTGAGCTTACGGACACGGGCATGGAGGGTTTTGCCAAGAATTGCAAGGGTTTGAAGAAACTTTCTTGCGGATCCTGCACTTTTGGAGCCAAAGGGATGAACGCGGTGCTCAATTATTGCGCCGCCATAGAGGAATTATCTGTAAAGCGTCTCCGGGGAATTACTGACGGAGCTGGGGTGGAGGCCATCGGATCCGGTGTTGCAGCGTCATCTCTCAAAACAATTTGCTTGAAGGAGCTATATAACGGACAATGTTTCGGGCCACTCATTCTTGGCTCGAAGAATCTAAGGACTTTGAAGCTTTTCAGGTGCTCTGGCGACTGGGATAAACTTTTTCAACTCCTAGCGGATCAAGCACCAAGTATGGTGGAAGTCCACCTTGAGAGGCTCCAGATTAGCGATATTGGCTTGGCGGCAATCTCCAATTGTTCAAGTCTGGAAATTTTGCATCTCGTCAAAACCCCAGAGTGCACAGATTTAGGACTCATGGCAATCGCAGAACGATGTAAGCTCTTGAGGAAACTTCATATTGACGGATGGAAGACGAACCGAATAGGCGATGAAGGTTTAATAGCAGTTTCTAAATACTGCCTTAATCTTCAGGAACTGGTCCTTATTGGTGTCAATCCCACAAACGCCAGTTTGGAAATGTTGGCATCCAATTGCCAGAATCTAGAACGATTGGCTCTATGCGGAAGTGATACAGTTGGTGATGTTGAGATATCCTGCATTGCAGCCAAATGTATAGCATTGAAGAAACTTTGTATTAAGAGTTGCCCTGTGTCTGATCACGGTATGGAAGCACTCGCAGCTGGGTGTCCCAATTTGGTGAAAGTGAAGGTTAAGAAGTGTAAGGGTGTAACCTCTGAGGGTGCAGATTGGCTGAGGTTAAGTAGGGGATCGCTTGCTGTAAATTTAGATGCTGGTGAAGCAGAACAACAAGAAGCAAGTACTAGTCAAGGTGGAGGAGCCCAAGATAATGGCATAGAATTTCTTTCAATCCCCAGGCAGACGGCACCCTCAGCCTCCATTGCATCAACCAGTACAGGTCGATCAACTTCATTCAAGTCAAGGTTAGGACTTTTCTCTGGCAAGAGTTTAATGGCTTGCACCTTAAGAAAGTTGTCTGGTGGTAACAGTAGTTCTCGACATGGTTAG 1623 0.488 MGQASSTAAIPCRRETIRTQRSSSKSRSTHVVSPMLPGENHESPLEVIHEDADYISHLPDECLACIFQSLGSADRNRCSLVCRRWLQIEGQSRHRLSLNAQSDLLPVVPSIFSRFDSVTKLALKCDRRSVSIGDEALVLISQRCPNLTRLKLRACRELTDTGMEGFAKNCKGLKKLSCGSCTFGAKGMNAVLNYCAAIEELSVKRLRGITDGAGVEAIGSGVAASSLKTICLKELYNGQCFGPLILGSKNLRTLKLFRCSGDWDKLFQLLADQAPSMVEVHLERLQISDIGLAAISNCSSLEILHLVKTPECTDLGLMAIAERCKLLRKLHIDGWKTNRIGDEGLIAVSKYCLNLQELVLIGVNPTNASLEMLASNCQNLERLALCGSDTVGDVEISCIAAKCIALKKLCIKSCPVSDHGMEALAAGCPNLVKVKVKKCKGVTSEGADWLRLSRGSLAVNLDAGEAEQQEASTSQGGGAQDNGIEFLSIPRQTAPSASIASTSTGRSTSFKSRLGLFSGKSLMACTLRKLSGGNSSSRHG 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1156 540 MobiDBLite consensus disorder prediction 1 40 - -
Sto5g1156 540 SMART LRR_CC_2 144 169 IPR006553 -
Sto5g1156 540 SMART LRR_CC_2 428 455 IPR006553 -
Sto5g1156 540 SMART LRR_CC_2 352 376 IPR006553 -
Sto5g1156 540 SMART LRR_CC_2 403 427 IPR006553 -
Sto5g1156 540 SMART LRR_CC_2 195 221 IPR006553 -
Sto5g1156 540 SMART LRR_CC_2 377 402 IPR006553 -
Sto5g1156 540 SMART LRR_CC_2 298 323 IPR006553 -
Sto5g1156 540 SMART LRR_CC_2 170 194 IPR006553 -
Sto5g1156 540 SMART LRR_CC_2 324 351 IPR006553 -
Sto5g1156 540 SMART fbox_2 58 98 IPR001810 GO:0005515
Sto5g1156 540 Pfam F-box domain 55 88 IPR001810 GO:0005515
Sto5g1156 540 MobiDBLite consensus disorder prediction 1 33 - -
Sto5g1156 540 Gene3D Ribonuclease Inhibitor 216 489 IPR032675 -
Sto5g1156 540 Gene3D Ribonuclease Inhibitor 108 213 IPR032675 -
Sto5g1156 540 SUPERFAMILY F-box domain 42 88 IPR036047 GO:0005515
Sto5g1156 540 SUPERFAMILY RNI-like 104 453 - -
Sto5g1156 540 Pfam Leucine Rich repeat 144 167 IPR001611 GO:0005515
Sto5g1156 540 Gene3D - 54 93 - -
Sto5g1156 540 ProSiteProfiles F-box domain profile. 52 88 IPR001810 GO:0005515
Sto5g1156 540 PANTHER UNCHARACTERIZED 38 464 - -
Sto5g1156 540 PANTHER F-BOX PROTEIN SKIP2 38 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1156 Sto-Chr5 7732844 7734466 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1156 5 7732844 7734466 Sto5g1156 5 7732844 7734466 ECH