Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1154 AtggctcatcatcatcatcattatgaaCAAGACAACCCGAGGTTCCATCTGGATGCCCTGTATTGTTCAGAAGAGCATTGGGAGGAGCAAGAAGTAGATCATGAGTGTTACCTTAGTGCTGAAATAAACTCAATGCTCTTGCTGGAACAGGACATGTCGTGGGATGATGAACACCTAACGTCTCTGCTAGCCAAGCAACGCCAAAACAAACTCTATACTTACCTCCACGCAAACCCACTTCTGGCCGGAGCTCGCAGAGAAGGGGTAGACTGGATTCTCAAAGTGAATGCTCACTACTCTTTCTCTGCTCTCACCGCTCTTCTTGCCGTTGACTACCTCGATAGGTTCCTTCTCAGCTTCCAATTTCAGAACGCCAAGCCATGGATGACCCAACTTGCTGCCGTCGCTTGTCTCTCCCTTGCTGCCAAGGTGGAGGAGACCCACGTCCCTCTTTTACTCGACCTCcagGTGGAGGACAGTAAATACCTGTTCGAAGCGAAAACCATCAAAAGAATGGAGATTTTGGTTCTTTCCACTCTTGGATGGAAGATGAATCCCGTAACGCCACTCTCCTTCCTCGATTACATCACTCGAAGACTGGGCTTAAAGGATTATCTCTGCTGGGAGTTCCTTAGGAGGTGCGAACGCATTCTTCTCTATGCCATTGCGGATTCGAGGTTTATGTGTTATGTTCCATCTGTGGTGGCCACTGCCACAATGATGCACGTTGTGAATAGCGTGGAAGCCCGTCTCGGAGCTGAGTACCAAAACCAGCTGCTGGGAATGCTTGGAATCGACAAGGAGAAGGTGGATGAGTGCTACAAGGTGATAGTGGAAATGATGTCAGGATTGGAGGTGAATGAGAAGCAATCCAAGAAACGCACGTTTGGATCCGTTCCGGGTAGCCCAAATGGCGTTATGGATGCATCCTTTAGCTGTGACAGCTCCAATGACTCTTGGGCCGTAGCTGCTTCTGCTTCCGTTTCCTCCTCACCGGAGCCTCTCTCCAAGAAGACCAGGACtagtactactactactacacaAGATCAGCTTCTACTAAACCATCCCAATTCAGAATTTCTCAGCATTCCTCCCTAG 1098 0.4718 MAHHHHHYEQDNPRFHLDALYCSEEHWEEQEVDHECYLSAEINSMLLLEQDMSWDDEHLTSLLAKQRQNKLYTYLHANPLLAGARREGVDWILKVNAHYSFSALTALLAVDYLDRFLLSFQFQNAKPWMTQLAAVACLSLAAKVEETHVPLLLDLQVEDSKYLFEAKTIKRMEILVLSTLGWKMNPVTPLSFLDYITRRLGLKDYLCWEFLRRCERILLYAIADSRFMCYVPSVVATATMMHVVNSVEARLGAEYQNQLLGMLGIDKEKVDECYKVIVEMMSGLEVNEKQSKKRTFGSVPGSPNGVMDASFSCDSSNDSWAVAASASVSSSPEPLSKKTRTSTTTTTQDQLLLNHPNSEFLSIPP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1154 365 Pfam Cyclin, N-terminal domain 73 185 IPR006671 -
Sto5g1154 365 PANTHER CYCLINS 40 340 IPR039361 -
Sto5g1154 365 MobiDBLite consensus disorder prediction 323 365 - -
Sto5g1154 365 CDD CYCLIN 85 177 IPR013763 -
Sto5g1154 365 MobiDBLite consensus disorder prediction 323 357 - -
Sto5g1154 365 PANTHER CYCLIN D3.1 PROTEIN 40 340 - -
Sto5g1154 365 SMART cyclin_7 90 178 IPR013763 -
Sto5g1154 365 Gene3D - 69 185 - -
Sto5g1154 365 SUPERFAMILY Cyclin-like 170 289 IPR036915 -
Sto5g1154 365 SUPERFAMILY Cyclin-like 54 185 IPR036915 -
Sto5g1154 365 Gene3D - 186 275 - -
Sto5g1154 365 SMART Cyclin_C_2 187 315 IPR004367 -
Sto5g1154 365 Pfam Cyclin, C-terminal domain 187 310 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1154 Sto-Chr5 7713826 7715209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1154 9 294 Core Cell Cycle Gene Families AT4G34160 51.890 5.63e-99 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1154 5 7713826 7715209 Sto2g0560 2 4768614 4769994 ECH
Sto5g1154 5 7713826 7715209 Sto10g0306 10 2420563 2422455 ECH
Sto5g1154 5 7713826 7715209 Sto5g1154 5 7713826 7715209 ECH