Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1124 ATGGACCCATCTATAGTGAAGCTGCTTGAAGATGACGAGGATGAAACAATGCATTCAGGGGCAGACGTGGAAGCCTTCCAGGCTGCCTTAAATAGAGACATAGGAGGAGACACGTCTACTTCTCAGCCTTCCGGTTCAGATGCAGTTTTGTCTCAAGGAAGCAGTAACACATTCAGTCAGTCATTACCACAGTGGCCCACTACTAGCCATGACAATTTAACTGACCGTCAAATTCAGCAAGACCCTAAAATTGCACAGAAGCAAGAACAACCTTCATCTGAAATGGAGATGAAACAACATGGATCTATCGAGGAACAAAATCATCCTCCTTTGTCACAGAAACAATCTCAAGAGGCATGTCAACAGGGGCAGACTGTACAGGGTTCCCTCCAAAATTCTCAAACAACTGGAATCTCAAATCCCGGAAAAGATTCAGTCCTTAATAACGAACCATTGAAAACACACAATCCTAGCAATGAATCTCAATATTTCAAGTTGCAGCAGATGAGTAATCAACAGGCAACAGTCACTGAGCAGCCAAGCAATCAAATGAATCGCAGTAAACAGGTACCATTTGGCCTGTTGCTACCTATCTTGATTCCGCAGCTTCCCAAGGACAGCGCCATGCAACTCCAGACTTTGTTTAATAAATTGAAGAAAGATGAAATTCCCAAAGATAATTTTGTGAGGCTCATGAAAGCTATTGTAGGGGATCAAATGCTTAGATTGGCATTAGCAAAAGTTCAATCTCAGGTATTGACGAGAACCAACCAAGGACTTGTTGGGAAGCACCCTATGAGAATGCCTAATGTTAGTTCAGGTGCAACACAATTTAATGATCCCCATGCATTAGCACAACTACATCAGAGAAGTGTGAATGCTCCTGCAGATCAATCTCATATTACTTCTTCAACAGTCCATGTGAAGAATGAGTCAATTTATCCTTCTATGGAGAACAATGCTAAAAAATCTCAGGAATTGGATGTTAAATTGCCATCTTCCAATTCCAATCCTGTTAGTCAAGAAGCAGAAAGGTCTTCAATGCCCGCGCAAGGTCTTAATAAGCAGCAGCAACAACATCTGCATTTTCCATCAGCATATGGAGGCAATGGTGGTAACTATAACACTTATTCTGGGACGACCAGTACTGCAACATCTCTCAAATCACAACCACATGATTCACATTTGAGGCAAATTTCACATCAAAATATTGGTCCAAATCACTTAGGGGGGGCAACACAGGGCATGAATGTAATTGGCCTGACAAAACTTGATAGACAAAATTCTATCAATGATCCAAAGAGAATGCCTGGAGGATCTGTTTCTTCTGTTGTAAATAATACAGGATCACAACAAACATCCAATGCTTGGCAACCATCAACAAATAAAGATCAAAGTTTGGGGTTATTGTCATCAGTTTCCTATGTCAAAAAGGAACCCAATGATCTGTCTACTGAGCAGCAACACAGACATCATTTGTCTAAATTGCATGGGCTGTCCTCTGTCAACTCTTCCCAGATTGAACAGGGAAGTGGCAATCTAGGAACTTTAAAGGATGAGTTTTCAAGGGGTCTTCCAGCATCTACAAGCATGCCACCTACAACTTCTAGCTTGTTGACGTCCAATTCTACACCCCCTTCTTTAATTGCTCAACTGGAACCAAGTGTCCCGttaagCTCCCAGATTTCTTCAAATCCTGCTGGGATTAATGCAAGGACGCCTCTGAAAAAGCCTTCTGTAGGCCAGAAGAAACCACTTGAAGCTCTTGGTTCCTCACCACCTCCTCCAAGTAAGAAACAGAAAGCATCTGGGGCTTCTCTGGAACAAAGCATTGAACAGCTTAATGATGTTACTGCTGTCAGTGGAGTTGATCTTAGGgaGGAGGAAGAACAGTTGTTTTCAGGGCCCAAAGAAGACAGTCGAATGTCAGAAGCATCTCGAAGAGTTgtgcaagaagaagaagaaaggctGATTCTGCAGAAAGCTCCATTGCAGAAAAAATTGATTGATATTATGGCCAAGTGTGGCTTGAAGGGTATGAGCAATGATGTAGAGAAATGCTTGTCTCTGTGTGTGGAGGAAAGAATGCGTGGACTGATAAGTAACCTAATTAGACTGTCAAAACAGCGAGTTGATTTTGAGAAGACCAGGCACCGGGTTGTTGTCACCTCAGATGTTCGGCAACAAATCATGACAATAAATAAGAAAGCAAAGGAAGAGTGGGAGAAAAAGCAGGCAGAAGCAGAGAAGCTCCGCAAAGTTAATGAAACTGATGGTAATCCTGGAGTTGATGGAGACAAAGATAAGGATGATAGTCGTAATAAATCAACTAAGGTAAATAAAGAAGAGGATGACAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGAGCTGCTGTTGGGGGAGATGACATGCTTTCAAAATGGCAGCTTATGGCTGAGCAAGCACGTCAGAAACGGGAGGGGGTTACAGACTCATCTAGTTCTCAACCAGCTAAAGATGTGAGCCGCAAGTCTTCGTCTTCATCTGGAAGAAGTTCGAAGGATAATCAAGATGGGGAGAAAAGAGGTTCAGCCCCTCTTGCCACTTCTGGGGCTGGTAGGAAACTTGGGAGAAATCAGGCCATTGCTTCGCAAACTCGGGTAGCTCGTAGCATTTCTGTTAAGGATGTAATTGCAGCCCTGGAAAGAGAACCCCAGATGTCCAAATCACCACTAATATATCGCTTGTACGACAGAATTCATTGTGATGCCCCAGCTGAATAA 2766 0.4244 MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDTSTSQPSGSDAVLSQGSSNTFSQSLPQWPTTSHDNLTDRQIQQDPKIAQKQEQPSSEMEMKQHGSIEEQNHPPLSQKQSQEACQQGQTVQGSLQNSQTTGISNPGKDSVLNNEPLKTHNPSNESQYFKLQQMSNQQATVTEQPSNQMNRSKQVPFGLLLPILIPQLPKDSAMQLQTLFNKLKKDEIPKDNFVRLMKAIVGDQMLRLALAKVQSQVLTRTNQGLVGKHPMRMPNVSSGATQFNDPHALAQLHQRSVNAPADQSHITSSTVHVKNESIYPSMENNAKKSQELDVKLPSSNSNPVSQEAERSSMPAQGLNKQQQQHLHFPSAYGGNGGNYNTYSGTTSTATSLKSQPHDSHLRQISHQNIGPNHLGGATQGMNVIGLTKLDRQNSINDPKRMPGGSVSSVVNNTGSQQTSNAWQPSTNKDQSLGLLSSVSYVKKEPNDLSTEQQHRHHLSKLHGLSSVNSSQIEQGSGNLGTLKDEFSRGLPASTSMPPTTSSLLTSNSTPPSLIAQLEPSVPLSSQISSNPAGINARTPLKKPSVGQKKPLEALGSSPPPPSKKQKASGASLEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRMSEASRRVVQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLCVEERMRGLISNLIRLSKQRVDFEKTRHRVVVTSDVRQQIMTINKKAKEEWEKKQAEAEKLRKVNETDGNPGVDGDKDKDDSRNKSTKVNKEEDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQARQKREGVTDSSSSQPAKDVSRKSSSSSGRSSKDNQDGEKRGSAPLATSGAGRKLGRNQAIASQTRVARSISVKDVIAALEREPQMSKSPLIYRLYDRIHCDAPAE 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1124 921 Gene3D Histone, subunit A 659 704 IPR009072 GO:0046982
Sto5g1124 921 PANTHER IP01149P-RELATED 39 915 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 813 882 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 33 97 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 744 790 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 822 847 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 10 158 - -
Sto5g1124 921 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 39 915 IPR045144 GO:0005669|GO:0006352
Sto5g1124 921 MobiDBLite consensus disorder prediction 323 388 - -
Sto5g1124 921 Coils Coil 642 662 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 497 516 - -
Sto5g1124 921 CDD TAF4 609 909 IPR007900 GO:0005669|GO:0006352
Sto5g1124 921 ProSiteProfiles RST domain profile. 183 254 IPR022003 -
Sto5g1124 921 Pfam Transcription initiation factor TFIID component TAF4 family 614 910 IPR007900 GO:0005669|GO:0006352
Sto5g1124 921 Pfam RCD1-SRO-TAF4 (RST) plant domain 186 249 IPR022003 -
Sto5g1124 921 MobiDBLite consensus disorder prediction 527 570 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 166 185 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 479 608 - -
Sto5g1124 921 Coils Coil 734 754 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 428 464 - -
Sto5g1124 921 MobiDBLite consensus disorder prediction 105 158 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1124 5 7540935 7547822 Sto5g1124 5 7540935 7547822 ECH