Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0446 ATGGACGTAATGGAGTTATGGGCAATCTTTGGGCCTGGCGTTGCCGGCGCCGTCTTCGGTGCCGGTTGGTGGATCTGGGTTGACGCCGTTGTCTGCAGCTTCGTTAAGGTTTCCTTCGTCCACTACCTTCCTGGAATTTTTGCATCTTTGGCGGCTCTGATGTTCAATTGTGTTAGGAAAGAAGACATTGATTACTCTCCCTATGACGAAGGAGAGTGGAGGGATCTTTCTCACTCTCTTCGCCATACAATTGCAGAGGACAAGCCTGGACTGAAGCTGTGGCTCTTCTTCGCATATGTTGTATCCTTTGTTTCTTTAGCTGCATCAGTGGGTCTACTTATACAGGATTCAATTGATAAATCTGCCCCTTCCGTGTGGACGGGAGCTGCAGGTGTTTTGCAGTGTGTGTTTGTCTTAATCAGAAGGTACTGGACCCAAGGCGGAACCTTGAGAAACGTTCGCATCGGAGGTGGCTGCCGCAAGCCCAATCGCCTCAAAACCTCTGCTTCCTCCTCCGCTGACACCCACCCCCTCTGCCGCAGCCGCAAACGTCTGTCCGTCGTGGGTTCGACTCCTCCCGCAGCGGCTCCGCAGCCGATGAGCCCCTTCTAG 612 0.5327 MDVMELWAIFGPGVAGAVFGAGWWIWVDAVVCSFVKVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYDEGEWRDLSHSLRHTIAEDKPGLKLWLFFAYVVSFVSLAASVGLLIQDSIDKSAPSVWTGAAGVLQCVFVLIRRYWTQGGTLRNVRIGGGCRKPNRLKTSASSSADTHPLCRSRKRLSVVGSTPPAAAPQPMSPF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0446 203 Pfam Dof domain, zinc finger 141 163 IPR003851 GO:0003677|GO:0006355
Sto5g0446 203 PANTHER SMALL MEMBRANE PROTEIN-RELATED 1 143 IPR007919 -
Sto5g0446 203 PANTHER GEO04055P1 1 143 - -
Sto5g0446 203 Pfam Uncharacterised protein family (UPF0220) 13 140 IPR007919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0446 Sto-Chr5 2779761 2784965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0446 141 171 C2C2-Dof Transcription Factor Family AT4G21050 67.742 9.41e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto5g0446 UPF0220 3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0446 - - rcu:8274306 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0446 5 2779761 2784965 Sto5g0446 5 2779761 2784965 ECH