Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0317 ATGAGAGGAACCTCCCCCAACATCGTAGAGCCGCGGCACCGGTTGTTGGCTTCAACTAAGACTCATGTAGTCCCAAAGAACGAAGTTAAATCAGGAAAACAACCATGGAATGTGTTCCAGTTCCTAGGCCATGGTTATAGTGCTACTGAAGATGCTAACAAGAGAAGATCTCAAAAAAGTAAATACTTTAAAGATGTTGAGAAGGCATTACATGCTCCTTTCCGAGATAGGAGTATAAATTGCAAGCCTACCTGGAAATTGGTTAtggttattattttattgggaACTTTAGTTACAATTTTCCATCCTCCAGCCATTTACAACACTGATCCTCTGTCAAACTCTATAACAAGACCAACCTTTGTAGACAAATGGAAAAAGGAGTTTGATACTACTGATCAGCGTTATGTATCACTTATAAATATTGAGTGGGGAGAAATATCAAAAGTTCTTGAAAAATTGACAGATAGGTTCACATATCAGGGAGTTGGCTTGTTAAACTTTAATGAAAGTGAGATTGACCACTGGAAACAGCTGATACCAGACGCTGAGCACATAGTCCTGCACCTGAACTCTGCTTCAAGTAACATTACATGGGAAGTCCTCTACCCTGAATGgatagatgaagaagaagaatttgagGTTCCCATTTGTCCTACGCTACCTAAGATTCAATCACCTGGAAAACCACGGCTTGATCTTGTTGCTGTCAAGCTTCCCTGCAACAAGTCAGGACGATGGTCAAGAGATGTGGCCCGTTTGCACCTGCAGCTTGAAGCAGCAAGGCTTGTGGCCTCTTCCAAAGGATCTCATCCGGTGCGTGTGCTTTTTGTCACTGACTGCTTCCCTATCCCAAATCTCTTTACCTGCAAGGACCTCATTCAACGTGAAGGGAGTGCATGGCTTTACGAACCTAACCTGCATATGCTGAGAGACAAGCTGCAGCTGCCAGTGGGATCATGTGAACTAGCAGTTCCCCTCAAGGCTAAAGAAAACTTCTACTCGGAAAGGGCACACCGGGAAGCTTATGCAACCATTCTGCACTCAGCACAAATATATGTTTGTGGAGCCATTGTTGCAGCTCAGAGTATTCGCATGGCTGGTTCAACACGAGATCTTGTGATTTTAGTTGATGAAACAATTAGTGACTATCATAGGGGAGGGTTGGAGGCTGCTGGATGGAAGATTCATACAATCCAAAGAATCAGGAACCCAAAGGCAGAACCTGAGGCATATAATGAGTGGAACTATAGCAAATTCCGCCTCTGGCAGCTAACAGATTATGACAAAATCATTTTCATTGATGCTGACCTGCTTATACTTAGAAATATTGATTTCCTCTTTGAGATGCCTGAAATATCAGCCATAGGAAACAATGCTACCCTTTTCAACTCAGGTGTCATGGTAATTGAACCATCAAATTGTACATTTCAACTGCTAATGGATCACATCGATGAGATTGTCTCCTACAATGGTGGGGACCAGGGGTATCTGAATGAAATATTCACATGGTGGCATCGGATTCCAAAACATATGAACTTTTTGAAGCACTTCTGGGAAGGTGATGAGGTTGAGAAAAAAGAGATGAAAACTAGTCTCTTCGGAGCTGATCCTCCAATCCTTTATGTCCTCCATTATCTGGGTAATAAACCCTGGATTTGCTTCCGAGATTATGACTGCAACTGGAACGTGGACATTCTGCAGGAGTTTGCAAGTGATGTGGCTCATGCTACGTGGTGGAAGGTGCATGATGCCATGCCCGAAAACCTACAGAAGTTCTGTTTGCTTAGGTCCAAGCAGAAGGCAGCATTAGAGTGGGACCGTAGACAAGCTGAGAAAGGAAACTACACTGATGGTCACTggaaaattaagataaaagacAAGCGTTTAAAAACATGCTTTGAGGATTTCTGCTTCTGGGAGAGCATGTTATGGCACTGGGGCGAAAAGAATTGGACAGATAATGCTACTGTGAATGATTCACCACCTGCCACAACGACACAATCTCTTTCTTCCTTATAA 2022 0.4204 MRGTSPNIVEPRHRLLASTKTHVVPKNEVKSGKQPWNVFQFLGHGYSATEDANKRRSQKSKYFKDVEKALHAPFRDRSINCKPTWKLVMVIILLGTLVTIFHPPAIYNTDPLSNSITRPTFVDKWKKEFDTTDQRYVSLINIEWGEISKVLEKLTDRFTYQGVGLLNFNESEIDHWKQLIPDAEHIVLHLNSASSNITWEVLYPEWIDEEEEFEVPICPTLPKIQSPGKPRLDLVAVKLPCNKSGRWSRDVARLHLQLEAARLVASSKGSHPVRVLFVTDCFPIPNLFTCKDLIQREGSAWLYEPNLHMLRDKLQLPVGSCELAVPLKAKENFYSERAHREAYATILHSAQIYVCGAIVAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAEPEAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEISAIGNNATLFNSGVMVIEPSNCTFQLLMDHIDEIVSYNGGDQGYLNEIFTWWHRIPKHMNFLKHFWEGDEVEKKEMKTSLFGADPPILYVLHYLGNKPWICFRDYDCNWNVDILQEFASDVAHATWWKVHDAMPENLQKFCLLRSKQKAALEWDRRQAEKGNYTDGHWKIKIKDKRLKTCFEDFCFWESMLWHWGEKNWTDNATVNDSPPATTTQSLSSL 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0317 673 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 338 589 IPR029044 -
Sto5g0317 673 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 3-RELATED 43 654 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Sto5g0317 673 PANTHER GLYCOGENIN SUBFAMILY MEMBER 43 654 - -
Sto5g0317 673 SUPERFAMILY Nucleotide-diphospho-sugar transferases 341 591 IPR029044 -
Sto5g0317 673 CDD GT8_Glycogenin 341 586 - -
Sto5g0317 673 Pfam Glycosyl transferase family 8 347 552 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0317 Sto-Chr5 1888634 1893696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0317 84 649 Glycosyltransferase AT1G77130 74.126 0.0 884