Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0310 ATGGAGAGGCTTCAAAGGATGTTTGCAGGTGCTGGAGGCGCATTGGGGCATCCACCCCCTGATTCACCCACCCTTGATTCTGCTGAGCAGGTTTACATCTCCTCCTTGGCCCTCCTCAAAATGCTTAAACACGGAAGGGCTGGTGTTCCCATGGAAGTGATGGGCTTGATGTTGGGAGAGTTCGTAGATGAGTATACTGTCCGCGTTGTTGATGTCTTTGCGATGCCACAGAGTGGTACTGGTGTTAGTGTTGAAGCCGTCGATCATGTTTTTCAGACTAGCATGCTCGATATGCTGAAACAGACTGGAAGACCAGAGATGGTTGTGGGGTGGTATCATTCTCATCCTGGATTTGGCTGTTGGCTTTCTGGAGTGGACATTAATACACAACAGAGTTTCGAGGCTTTAAATCCACGTGCTGTGGCTGTTGTGGTTGATCCTATTCAGAGTGTTAAAGGAAAGGTGGTCATTGATGCTTTTCGGCTTATTAATCCTCAAACTATGATGCTGGGTCAGGAACCACGGCAAACAACATCTAACCTTGGTCATCTTAATAAGCCATCTATACAAGCTTTGATCCATGGCTTGAACCGACATTATTATTCCATCGCCATCAATTACAGGAAGAATGAGCTTGAAGAGAAAATGTTACTTAACCTTCACAAGAAGAAATGGACTGATGGTTTGACGCTTAGGCGTTTTGATTCACATTCCAAAACTAACGAACAGACAGTACAGGAGATGCTAAATTTAGCTATCAAGTACAACAAGGCAGTGCAAGAGGAGGATGAGTTGCCGCCAGAAAAGCTTGCAATTGCTAACGTGGGAAGGCAAGATGCTAAGAAGCACCTTGAGGAGCATGTTTCCAATTTGATGTCATCAAACATAGTTCAGACATTGGGGATGATGCTTGATACAGTTGTATTTTAG 930 0.4473 MERLQRMFAGAGGALGHPPPDSPTLDSAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTSMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDSHSKTNEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGMMLDTVVF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0310 309 ProSiteProfiles MPN domain profile. 31 166 IPR037518 -
Sto5g0310 309 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 1 309 - -
Sto5g0310 309 CDD MPN_RPN11_CSN5 20 286 - -
Sto5g0310 309 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 14 HOMOLOG 1 309 IPR035299 GO:0008237|GO:0061578
Sto5g0310 309 Pfam Maintenance of mitochondrial structure and function 173 296 IPR024969 -
Sto5g0310 309 SMART pad1_6 30 165 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto5g0310 309 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 27 138 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sto5g0310 309 SUPERFAMILY JAB1/MPN domain 31 168 - -
Sto5g0310 309 Gene3D Cytidine Deaminase, domain 2 17 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0310 Sto-Chr5 1858565 1861818 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0310 5 1858565 1861818 Sto5g0310 5 1858565 1861818 ECH