Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0299 ATGCAGGGAAGCTTGGTGGATGGTACGGCAAAAGCATCAACAAGAGATAGAAAATCGGCTTTGCAACAAGATGTTGATAAGTTGAGGAAGAAGCTCAGGCATGAAGAGAACATCAACAGGGCATTGAAGAGGGCTTTAAACAGGCCTCTGGGAGCTCTGCCTCGTCTTCCTCCTTATCTCCCTCAATACatACTGGCGTTGTTGGCCGAAGTGGCAGTTCTGGAAGAGGAAATTGTAAGGCTTGAAGAGCAGGTGGTGGATTTGAGGCAGGACTTGTACGAGGAAGCTGTGTACATGTCATCTTCTAAGAAGAAGATGGAGCATTTCAATGAGGAAAATCCAACGGACAGTCCCAAACTTGTGATTGTGTTGCCAGAGGATGGACAAGGAAAAGAGAATCAGTCATGCATTAATTCTTCCAAGGGCACTAAGACCAAAACTCCAACTAAGAAACTTCCCATTGACAATAAGTCAGTGCAGAAACGAAGGGGGAGGCAGGCAGAAGTAAGGGTGAAGGACCAGCCAATTGCTCAAGTAAGGAATCCGAGTGTCCATGAAAATTCACCAAGAGATGAGAGCCCAAATATAATATCAGAAAATATTGTTAAGTGTTTAACAAGCATTCTCTTGAGAATGAGTTCAGTGAAGAATGTGGGCGCTGCAGATGACTCACCATCCCTAAGGGCTCTCAAAACTCGAAACTATGTTGAAGAAACTGAATTTTGGGATCCTTATGGTATCTGTTCCGAATTCGGGAAGAGGGATATTGGTCCATACAAGCAATTATGTGCAATTGAAGCTAAATCTTTCAACCCAAAAAGAACAGCAAAGTCTCTGTTTTTACTGTGTCGATTGAAACTTCTTCTACGAAAGCTTGGCTGTGTCAGGTTAGACAACCTCAACCACCAGGAGAAGCTTGCATTCTGGATCAACATTTATAACTCCTGCATGATGAATGCATTGATAGAGAATGGTATCCCGGAGAGTCCTGAAATGGTTGTTGCACTGATGCGGAAGGCGACAATAAATGTGGGGGGGTACTTGCTAAGTGCGACCACAATAGAACATTGCATCCTGAGGCTTCCTTATCACTGGAAATTGCTAAATACCACACAGACATTTTCCAAGGGAGGCAAGAATCATGAAATGGCAGTAAGAAGTATATTTGGACTGGAATTGTCAGAACCTCTAGTCACATTTGCACTTTGCTGCGGAACTTGGTCCTCTCCTGCGGTGAGAGTTTACTCGGCATCCCAGGTTGAGAAGGAACTTGAAGTGGCAAAAAGAGAGTATTTAGAGGCAGCAGTTGGAATTTCGACATCCAAGTTTGCAATCCCCAAACTGCTGAATTGGTATTTACTGGACTTCGCAAAAGATTTGGAATCATTGCTGGATTGGATCTGCCTGCAGTTACCAAGTGAAGTAGGAAAAGAAGCCATTCATTTGCttgagaaaagaaaaaccgagCCCCTCTCTCAATATGTACAAATTATGCCTTATGAGTTCAGTTTTAGATATCTGCTCTGCACATAA 1533 0.4286 MQGSLVDGTAKASTRDRKSALQQDVDKLRKKLRHEENINRALKRALNRPLGALPRLPPYLPQYILALLAEVAVLEEEIVRLEEQVVDLRQDLYEEAVYMSSSKKKMEHFNEENPTDSPKLVIVLPEDGQGKENQSCINSSKGTKTKTPTKKLPIDNKSVQKRRGRQAEVRVKDQPIAQVRNPSVHENSPRDESPNIISENIVKCLTSILLRMSSVKNVGAADDSPSLRALKTRNYVEETEFWDPYGICSEFGKRDIGPYKQLCAIEAKSFNPKRTAKSLFLLCRLKLLLRKLGCVRLDNLNHQEKLAFWINIYNSCMMNALIENGIPESPEMVVALMRKATINVGGYLLSATTIEHCILRLPYHWKLLNTTQTFSKGGKNHEMAVRSIFGLELSEPLVTFALCCGTWSSPAVRVYSASQVEKELEVAKREYLEAAVGISTSKFAIPKLLNWYLLDFAKDLESLLDWICLQLPSEVGKEAIHLLEKRKTEPLSQYVQIMPYEFSFRYLLCT 510
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0299 510 MobiDBLite consensus disorder prediction 1 25 - -
Sto5g0299 510 Coils Coil 11 45 - -
Sto5g0299 510 MobiDBLite consensus disorder prediction 148 169 - -
Sto5g0299 510 Coils Coil 64 91 - -
Sto5g0299 510 MobiDBLite consensus disorder prediction 11 25 - -
Sto5g0299 510 MobiDBLite consensus disorder prediction 129 169 - -
Sto5g0299 510 PANTHER TRANSCRIPTION FACTOR 10 509 - -
Sto5g0299 510 Pfam Leucine-zipper of ternary complex factor MIP1 15 95 IPR025757 -
Sto5g0299 510 MobiDBLite consensus disorder prediction 174 193 - -
Sto5g0299 510 Pfam Protein of unknown function, DUF547 298 432 IPR006869 -
Sto5g0299 510 MobiDBLite consensus disorder prediction 131 147 - -
Sto5g0299 510 PANTHER EXPRESSED PROTEIN 10 509 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto5g0299 Sto-Chr5 1776270 1778657 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0299 5 1776270 1778657 Sto9g3579 9 34619821 34621728 CCT
Sto5g0299 5 1776270 1778657 Sto5g0299 5 1776270 1778657 ECH