Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0293 ATGGCTCTAACGGACTTCTTCGCAGGCGAAATCGCGACGGAGCTTCTGAAAATGCTGATAAACATATCACGCAAGTCACTGCTATGCAAATCAAGCGCGGATCAGCTGATAAGCTACATCCAGCAACTCCTCCCCACCATCGAGGAAATCAAATACTCCGGCGTCGAACTTCCCGCCGCCCGCCAATCCCAGCTCGATCGCCTCTCCGAGATTCTCCGCTCCGGCGTCGAGCTCTCTCACAAGGTTCTCTCCTCCGGCCGCTGGAACGTCTACAAGAACCTCCAGCTAGCCAAGAAAATGGAGAAGCTCGAGAAGAACGTTTCCAGGTTCGTGCAGGGTCCCATGCAGGCTCATATCCTCGCCGATGTCCACCACACCAGGTTCGAGATGACCGAGCGCTTCGATAGGGTGGAGGCTTCGAACCGGCGGCTGGAGCAGTACTTCGGGGCCATGAAGATTGGGGTCGGGGGAGGAGGGTGGGTGGAGGAGGCCGTCAAGAGTATGGAGGAGGATGAGAGGGTGGATGGAACTAATTCTGTGGGAGTGACTTTGGATTTGGGGAAGAAGAAGGTTAAGGAGCTGGTTGTTGGAAGGCAGGACTTGTGGGTCGTTGGAATTTGTGGCATTGGTGGATCAGGCAAGACCACTCTCGCCAGAGAGCTCTGCAGAGATGATCAAGTTCGAAGTTATTTCAAGGAGAGAATCTTGTTCCTCACAGTTTCACAGTCTCCAAATGTGGAGCAGTTGAGAACCAAAATTTGGGGATTTATTATGGGCAACGATAATTTGAACCCAAATTATGTGGTTCCACAATGGAAGCCTCAATTTGAATGCGCAAGTGAGGCACGAATCCTGATTGTTTTGGACGACGTGTGGTCACTCTCTGTTCTAGAACAGCTTGTCTGTAGAATACCTGGTTGTAAATTCGTCGTGGTCTCAAGATTTAAGTTCCCAACAGTTTTCTCTGTCAGCCACGAAGTGGAGCTATTGAGCGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCCTTTGGGCAGAAGTCGATCGCTTTTGCTGCTAATGAGAATTTGGTGAAGCAGATTGTGACCGAGTGTGGGAGACTTCCATTAGCGCTtaaagtgattggagcttcattAAGAGATCAGTCTGAGATGTTTTGGGTAGGTGTGAAAAACAGGCTATCCCAAGGCCAAAGCATAGGGGAATCTTATGAAATCAATCTGATTGAAAGAATGGCAATCAGTATCAATTACCTGCCAGCAACTATCAAGGAGTGCTTCTTGGATCTCTGTTCTTTTCCAGAGGACAAGAAAATTCCTCTGGATGTTCTCATCAATATGTGGGTTGAAATCCATGATATTGATGAAACTGAAGCTTTTGCTATTGTCGTTGAGCTCTCCAACAAGAATCTTCTCACCTTGGTGAAAGAGGCACGTGCTGGAGGCATGTATAGCAGTTGCTTTGAGATCTCTGTAACGCAACATGATGTACTGAGAGACGTTGCTCTTAATTTGAGCAATCGTGAGAGCATTAATCAACGCCGGCGGTTGGTTATGCCTAAAAGAGAAAACGGAGTGCCTAAAGAGTGGTTCAGAAAGAAAGATACACCATTCGAGGCTCAGATTGTTTCAATTCACACtgGTGAAATGAAAGAAGCGGATTGGTTTAGAATGGAATTTCCAAAGGCGGAAGTGCTGATCATTAATTTCTCCTCAAGTGAATACTTCTTACCTCCCTTCATTGATAGAATGCCAAATTTGAGGGCATTAATATTGATAAACTATAGTGCATCATATGCATCCTTTCACAACTTTAGTGTTTTCGAGAATCTGGCTAGCTTGAGGAGTCTCTGGCTTGAAAAAGTTTCTATCCCTCAATTATCAGACACTCCCCTGATAAACTTGCGGAAATTATTTGTTGTCCTCTGCAAAATAAACAACAATCTGGATGGGGAAATGGCAGATTTAACCCATAGCTTCCCAAACCTCACGGAGCTCACACTTGATCACTGCGATGATTTGACTGAGCTTCCTTCAAGCATTTGTAGAATGGGATCACTACAGAATCTGAGTCTGACCAACTGCCATAATTTAACCCAACTTCCTAATGAATTGGGAGAAGTAGGATCTCTGGTGATCCTTCGATTATATGCTTGTCCAGCACTAGAGGCATTACCTGCTAGCATCGGTGAGCTTAGTAGGCTGAAGTACATTGACATTTCTCAATGTGTAAATCTGGGATGCTTCCCGGTGGAGATAGGTAAATTAGTGAAGTTGGAGAAGATAGACATGAGGGAGTGCTGTTTGATTAAGGTTTTACCGAAGTCTGCAGTGTCATTGAAGTCACTGCGGGTAGTGATATGTGATGAGGAGGTGTCAGGGATGTGGAGAGACGTGGAGAAGTGTAAGCCAGATGTCCATATTCAAGTATCAGAGCAGTACTATGATCTGGACTGGCTTAACGACAAATGA 2472 0.4567 MALTDFFAGEIATELLKMLINISRKSLLCKSSADQLISYIQQLLPTIEEIKYSGVELPAARQSQLDRLSEILRSGVELSHKVLSSGRWNVYKNLQLAKKMEKLEKNVSRFVQGPMQAHILADVHHTRFEMTERFDRVEASNRRLEQYFGAMKIGVGGGGWVEEAVKSMEEDERVDGTNSVGVTLDLGKKKVKELVVGRQDLWVVGICGIGGSGKTTLARELCRDDQVRSYFKERILFLTVSQSPNVEQLRTKIWGFIMGNDNLNPNYVVPQWKPQFECASEARILIVLDDVWSLSVLEQLVCRIPGCKFVVVSRFKFPTVFSVSHEVELLSEEDALSLFCHHAFGQKSIAFAANENLVKQIVTECGRLPLALKVIGASLRDQSEMFWVGVKNRLSQGQSIGESYEINLIERMAISINYLPATIKECFLDLCSFPEDKKIPLDVLINMWVEIHDIDETEAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDVALNLSNRESINQRRRLVMPKRENGVPKEWFRKKDTPFEAQIVSIHTGEMKEADWFRMEFPKAEVLIINFSSSEYFLPPFIDRMPNLRALILINYSASYASFHNFSVFENLASLRSLWLEKVSIPQLSDTPLINLRKLFVVLCKINNNLDGEMADLTHSFPNLTELTLDHCDDLTELPSSICRMGSLQNLSLTNCHNLTQLPNELGEVGSLVILRLYACPALEALPASIGELSRLKYIDISQCVNLGCFPVEIGKLVKLEKIDMRECCLIKVLPKSAVSLKSLRVVICDEEVSGMWRDVEKCKPDVHIQVSEQYYDLDWLNDK 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0293 823 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 819 - -
Sto5g0293 823 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Sto5g0293 823 Pfam NB-ARC domain 192 409 IPR002182 GO:0043531
Sto5g0293 823 Gene3D - 410 501 IPR036388 -
Sto5g0293 823 Gene3D - 329 409 IPR042197 -
Sto5g0293 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 430 IPR027417 -
Sto5g0293 823 Gene3D - 161 320 IPR027417 -
Sto5g0293 823 PRINTS Disease resistance protein signature 203 218 - -
Sto5g0293 823 PRINTS Disease resistance protein signature 278 292 - -
Sto5g0293 823 PRINTS Disease resistance protein signature 365 379 - -
Sto5g0293 823 PRINTS Disease resistance protein signature 730 746 - -
Sto5g0293 823 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 132 IPR008808 -
Sto5g0293 823 Gene3D Ribonuclease Inhibitor 544 791 IPR032675 -
Sto5g0293 823 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 819 IPR044974 GO:0006952
Sto5g0293 823 SUPERFAMILY RNI-like 573 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0293 Sto-Chr5 1743510 1746418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0293 596 799 Receptor kinase-like Gene Family AT5G27060 27.805 1.26e-11 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0293 5 1743510 1746418 Sto5g0293 5 1743510 1746418 ECH