Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0283 ATGTTCAGTAGTAGTACTAGCTCACAGGCTGTAATTGGAAGCTTCACAAGTTTGCCAGAGCTGTCCTTAAACATCAGCCCACCCTGTGTTTCAGCCAAAAGTGTTCACAACAATGAAATGTGCTCAACCTCTGACTCTGCAGGTAGCACTGGCAGCGACTTAAGCCATGACAACTCTTTTCTTCATCTCGCCCATTGTGACCCCAATACTCCCACATTGAGCTTAGCCTTAGAAACCCCAGATTTGATTAGTCCCCGGGCCCATCTTCTCTCAAGACACTTtactcatcatcatcacttCCACAACCATCAACCTCATATTTATGGGCGGGACTTCAAACGAAACGCAAGActcactaataataatatcaatGGTGTCAAAAGAAGCATCAGAGCTCCTAGAATGAGATGGACCACAACCCTCCATGCCCAGTTTGTTCGTGCTGTTCAGCTGCTTGGCGGTCACGAAAGGGCTACACCAAAGTCTGTATTAGAATTGATGAATGTGAAGGATCTAACCTTAGCTCACGTCAAGAGTCACTTGCAGATGTACAGAACAGTGAAGAGCACCGACAAAGGTCATGATGGGGAGACAGTGGAGATAGGTTTGAAGCATGGAGATAGGGCAGGGATTAATATTGTGGATGTGCATGGAGGCTCAGCTTGTGATGATACATTCTATAATTTATTACCACAACCCCTCCACAAACCCCACAGCATACACAGAGCATCATCATGGCAATCATCAAAGGAGATAAATACAAAGAATAGTAGACAAAAGGCCCAAACCAATTTGACGTATTCTTATGATCTCAAGGCAAAGGAAACAAAGGTGGATGGACAGAATAGCGTGGAGGAGAGATTGGATTCTAGCTGTTTGTCACGTTCGGATATGATGCTTGACCTAGAATTCAGCCTTGGAAGACCCAGTTGGAAAACAGACCATGCCCAATCTTCAACAGACTTAACTCTTCTCAACTATTAA 984 0.4319 MFSSSTSSQAVIGSFTSLPELSLNISPPCVSAKSVHNNEMCSTSDSAGSTGSDLSHDNSFLHLAHCDPNTPTLSLALETPDLISPRAHLLSRHFTHHHHFHNHQPHIYGRDFKRNARLTNNNINGVKRSIRAPRMRWTTTLHAQFVRAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGHDGETVEIGLKHGDRAGINIVDVHGGSACDDTFYNLLPQPLHKPHSIHRASSWQSSKEINTKNSRQKAQTNLTYSYDLKAKETKVDGQNSVEERLDSSCLSRSDMMLDLEFSLGRPSWKTDHAQSSTDLTLLNY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0283 327 SUPERFAMILY Homeodomain-like 130 187 IPR009057 -
Sto5g0283 327 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 133 186 IPR006447 GO:0003677
Sto5g0283 327 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 3 323 IPR044847 GO:0000976|GO:0006355|GO:0010158
Sto5g0283 327 Gene3D - 132 189 - -
Sto5g0283 327 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 3 323 - -
Sto5g0283 327 MobiDBLite consensus disorder prediction 241 260 - -
Sto5g0283 327 Pfam Myb-like DNA-binding domain 134 185 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0283 Sto-Chr5 1679391 1682019 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto5g0283 Myb_DNA-binding 2e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0283 5 1679391 1682019 Sto9g3597 9 34708157 34710505 CCT
Sto5g0283 5 1679391 1682019 Sto5g0283 5 1679391 1682019 ECH