Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0275 ATGGCGAAATCGAGCGCGGACGATGCTGAACTTCGACGAGCTTGCCAGGCTGCAATTGAGGGCACCAAGCAGAATATCGTTATGTCGATCCGTGTTGCTAAGAGTCGCGGCATTTGGGGAAAACCCGGCATGTTAGGCCGTCAACAAATGGCCAAGCCTAGGATTCTCGCTCTCTCCAttaattgctaTTTGCTGGTCATGCATGCAGCAAAAGTAAAAGGTCCGCGGACAAAGGCTTTTCTTCGAGTCTTAAAGTACTCCACAGGAGGAGTTATTGAGGCTGCAAAGCTATACAAGCTGAAGCACCTTTCAAAAATGGAAGTTGTAACGAATGATCCCAGTGGATGTACGTTCACGCTGGGATTTGATAATCTTAGAAGCCAGAGTGTAGCTCCGCCTCAATGGACAATGCGCAACGTTGATGACAGGAATCGGATCCTTTTTTGCATATTAAATCTATGCAAAGATGTACTTGGTCGCCTTCCTAAGGTTGTTGGTATAGATGTTGTCGAGATGGCTCTTTGGGCTAAGGAAAACACACCGGCAGTTCCTGCTCAAAGGGACCCAATAGATGGTGGTCCTGTTGAATCTGTTGTGACTGAAACAGAACTGAAAGTCAATGTGGAAAAGGAACTTGTTTCCCAAGCAGAGGAGGAGGACATGGAGGCTCTTCTGGGAACTTATGTCATGGGTGTTGGTGAAGCAGAGGCATTTTCTGAAAGGATGAAGAGAGAGCTCCAGGCTCTGGAAGCAGCAAATGTGCATGCCATCTTAGAAAGTGAACCTATGATAGATGAGGTGTTGCAAGGGCTTGAAGCAGCAGCACATTGTGTAGAAGACATGGATGAATGGTTAGGCATGTTCAATGTGAAACTCCGCCACATGAGAGAGGATATTGAATCAATAGAAACCCGCAATAACAAGTTGGAGACGCAATCAGTAAATAATAAAGCTCTTATTGAGGAGCTTGATAAGCTTCTTGAGCGGTTGCATGTCCCTCAAGAGTATGCAGCGAGTCTGACAAAAGGTTCATTTGATGAGGCGCACATGCATCAAAACATTGAAGCATGTGAGTGGTTGACAGAGGCCTTGGAAGGTCTTGAAGTGCCTAATATAGATCCTACTTTTGCAAAAATGAAAGCTGTTAAAGAGAGGCATGCAGAACTCGGAAAATTAAAATCTACTTTTGTCTGGAGAGCTTCTGagtacttaaaaaattactttgctAGTTTGGTGGATTTCATgattaatgataaaaattacttttctcAGCGGGGACAGTTAAAGAGGCCTGATCATGCTGACTTGCGGTACAAGTGCAAGATATATGCACGCCTTCTACAACATTTAAAGAGTCTTGATAAGAATGGCTTAGATCCAATGAGAAAAGCTTATTGCAGTTCTGTTAACTTGCTTCTTCGAAGGGAGGCCCGTGAGTTTTCAAATGAACTTCGTGCTAGTACTAAAGCGCCTAAGAACCCAACTATTTGGCTCGAGGCTTCCGCAGGTTCAGGTCAGAATGCACATGCTGCTGACACTTCTTCAGTTTCTGAGGCTTATGCAAAGATGCTCACAATTTTTATCCCACTTCTGGTGGATGAGAGCTCTTTTTTTGCAAACCTTATGTGCTTTGAAGTTCCCACATTGCTTCCTTCGGGAGGCACTGTcagggatgatgatgatgatgaggatgatgCAAATGAAGATGATTTGGGAATTGAGGATATTGATGAGACTGATGGCAGCTCTGGTATAAATTCTGCAGAACTTGCATCTTTGAATGAATACCTTCAGGATTTGCTTAATGGAATCCAAGAAGACTTCTACGCTGTTGTGGATTGGGCCTACAAGATTGATCCATTACGATGCATATCAATGCATGGAATAACAGAGCGCTATCTCTCCAGTCAGAAAGCTGATGCAGCAGGATTTGTACGCATTTTGCTTGGTGACCTAGAGTCTCGGATATCCATGCAGTTCAGCCGTTTTGTAGACGAAGCTTGCCATCAGATTGAAAGATATGAGCGCAATGTTCGCCAAATGGGTGTCTTGGCTTATATTCCCAGATTTGCAACCCTTGCAACAAGGATGGAGCAGTACATCCAGGGACAATCTAGGGATTTGGTTGACCAAGCATATACCAAATTTGTAAGCATAATGTTTGTGACTCTGGAAAAAATTGCGCAAACAGATCCAAAGTACgaagatatttttctttttgagaaCTATGCAGCATTTCAAAATAGTTTGTATGACCTGGCCAATGTTGTCCCCACGTTGGCCAAGTTTTACCATCAGGCTAGTGAAGCCTATGAACAAGCTTGCACACGCCATATTAGCATGATTATTTACTATCAATTTGAACGTCTTTTCCAGTTTGCTAAAAAGATCGAGGACTTGATGTTCACCATCGCACCTGAAGAGATTCCTTTCCAGCTGGGGTTGTCAAAAGCGGATCTTAGGAAGATATTAAAATCCAGTTTGACAGGGGTTGATAAGTCCATTGCTGCAATGTACAAGAAATTACAGAAGAACTTGACTTCAGAGGAACTATTACCTTCTTTATGGGAAAAATGCAAGAAGGAGTTTCTTGACAAGTATGAAAGTTTCGCCCAGCTTGTCGTCAAGACATACCCTACGGAGTCAATACCATCTGTAGCAGAGATGAGAGACATTTTAGCTACACTCTGA 2691 0.4199 MAKSSADDAELRRACQAAIEGTKQNIVMSIRVAKSRGIWGKPGMLGRQQMAKPRILALSINCYLLVMHAAKVKGPRTKAFLRVLKYSTGGVIEAAKLYKLKHLSKMEVVTNDPSGCTFTLGFDNLRSQSVAPPQWTMRNVDDRNRILFCILNLCKDVLGRLPKVVGIDVVEMALWAKENTPAVPAQRDPIDGGPVESVVTETELKVNVEKELVSQAEEEDMEALLGTYVMGVGEAEAFSERMKRELQALEAANVHAILESEPMIDEVLQGLEAAAHCVEDMDEWLGMFNVKLRHMREDIESIETRNNKLETQSVNNKALIEELDKLLERLHVPQEYAASLTKGSFDEAHMHQNIEACEWLTEALEGLEVPNIDPTFAKMKAVKERHAELGKLKSTFVWRASEYLKNYFASLVDFMINDKNYFSQRGQLKRPDHADLRYKCKIYARLLQHLKSLDKNGLDPMRKAYCSSVNLLLRREAREFSNELRASTKAPKNPTIWLEASAGSGQNAHAADTSSVSEAYAKMLTIFIPLLVDESSFFANLMCFEVPTLLPSGGTVRDDDDDEDDANEDDLGIEDIDETDGSSGINSAELASLNEYLQDLLNGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSSQKADAAGFVRILLGDLESRISMQFSRFVDEACHQIERYERNVRQMGVLAYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQTDPKYEDIFLFENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFAKKIEDLMFTIAPEEIPFQLGLSKADLRKILKSSLTGVDKSIAAMYKKLQKNLTSEELLPSLWEKCKKEFLDKYESFAQLVVKTYPTESIPSVAEMRDILATL 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0275 896 MobiDBLite consensus disorder prediction 553 584 - -
Sto5g0275 896 Coils Coil 292 329 - -
Sto5g0275 896 SMART Sec3_PIP2_bind_2 49 157 IPR028258 -
Sto5g0275 896 Coils Coil 199 219 - -
Sto5g0275 896 Pfam Exocyst complex component Sec3 591 879 IPR019160 GO:0000145|GO:0006887
Sto5g0275 896 Pfam Exocyst complex component Sec3 235 501 IPR019160 GO:0000145|GO:0006887
Sto5g0275 896 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 895 - -
Sto5g0275 896 Coils Coil 232 259 - -
Sto5g0275 896 MobiDBLite consensus disorder prediction 557 577 - -
Sto5g0275 896 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 62 155 IPR028258 -
Sto5g0275 896 PANTHER SEC3/SYNTAXIN-RELATED 1 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0275 Sto-Chr5 1625594 1634375 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0275 5 1625594 1634375 Sto5g0275 5 1625594 1634375 ECH