Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0240 ATGCCCTTGTCGTCCGTCCCAGCGCGTCTTACGCTTCTCGCCCTTTTCTCTGTCACCACCTTCTATTGTCTCTACAAATCTCGCCGTCTTAGACACCTTAAACTctccctataccctaagcctAGTCTTCCCTCCACCAGAGGCAAGATTCTCTTCGTTTCTCAAACAGGTACCTCTAAAGCCCTTGCTCAGCGTCTTCACCAGCTGTTGACGTCCAACGATCTCGCATTCGACCTCATCGACCCCAAAGACTACGAGCCTGAAGACCTTCCTAAAGAAACTCTCGTCCTCATCGTAGCTTCAACCTGGGAAGATGGAAAACCACCTCCTAGTGCTAAATTCTTCGCAACTTGGCTCGCTGAAAGTGCCAAGGATTTTAGGGTGGGTTCGTTGTTGCTTTCAAAGTGCAGATTTTCAGTATTTGGTGTCGGAAGCCGAGCTTATGGAGCTACTTTCAATGCGGTCGCAAGGGATTTTGCAAGGCAGATGAAGGCATTGGGTGCTTCGGAAATCCTTCCTGTGTGGGAAGGAGATGTGGACGGGGGTGATGTAGATGGAGTTTTTGATCTTTGGTGTGCAAAGATAGCTGGGTTTTTGAAGGGTACTGTTTTAGAAAATGGCGGGGTTTCGGAATCCAGTTTTGGTGGAGAATGTAATGCTCCAAGCCTTGAGGAGTCCGAAGAGGATTCTGATGGAGAGAACGATATGAAGTCGGAGATTGTAGATCTTGAGGACATTGCGGGCAAAGCTCCTTCGAGGAAGTCAGTACCAGTAGTTGAAACTAATGGGAAATTGGATGGCCAAAGAGAAATGGTGACTCCGGTGATTAGGGCAAACTTAGAAAAACAGGGATATAAAATTATTGGTTCACACAGCGGTGTTAAAATTTGTAGATGGACCAAGTCACAACTTCGAGGTCGAGGTGGTTGCTACAAGCACTCATTTTATGGCATTGAGAGTCATAGGTGTATGGAGGCAACCCCTAGTTTGGCATGTGCaaataaatgtgttttctgcTGGAGGCATCACACAAATCCAGTAGGGAAAAGTTGGCAGTGGAAGATGGATGATCCAGTAGAGATCGTAAATTCTGCTATCGACCTACACTCAAATATGATTAAGCAAATGAAAGGAGTTCctgGAGTCACCTTGGAGCGATTATTTGAAGGTCTCTCTCCTCGCCATTGTGCCTTGTCGCTTGTTGGAGAACCTATCATGTATCCAGAGATAAACATCCTTGTGGATGAGCTGCATAAACGGCGGATTTCCACATTTCTGGTGACAAATGCACAGTTTCCAGAGAAGATTAAGTTGCTAAAGCCTATAACCCAGTTATATGTCAGTGTGGATGCTGCCACAAAGGACAGTTTGAAGGCAATTGATAGGCCACTCTTTGGAGATTTCTGGGAACGATTCATTGATTCCTTGACTGCTCTAAGGGAGAAAGAGCAGCGAACTGTTTATCGTTTGACCCTGGTAAAAGGTTGGAATACTGAAGATGTGGATGCATATTTCAAGCTCTTTAGTATAGGAAAACCTGACTTTGTAGAAATCAAAGGAGTTACTTACTGTGGATCGTCTGCTACATCAAAATTGACCATGGAAAATGTCCCTTGGCATGCTGATGTTAAAGCTTTCTCAGAGGCCTTAGCTCTGCAAAGCCAAGGGGAGTATGAAGTTGCATGCGAGCATGTTCACTCATGCTGTGTTCTCTTGGCAAAAACCGATAAGTTCAAGATTGATGGCCAATGGTATACATGGATAGACTATGAGAAATTTCATGACCTGGTGGCTTCTGGGAGACCTTTTACCAGTAAAGATTACATGGCTGCCACACCATCCTGGGCCGTCTATGGAGCAGATGAAGGTGGATTTGATCCAGCACAATTGAGATATAGGAAAGAGCGACATCATAAATCAAGCCGATGA 1929 0.4438 MPLSSVPARLTLLALFSVTTFYCLYKSRRLRHLKLSLYPKPSLPSTRGKILFVSQTGTSKALAQRLHQLLTSNDLAFDLIDPKDYEPEDLPKETLVLIVASTWEDGKPPPSAKFFATWLAESAKDFRVGSLLLSKCRFSVFGVGSRAYGATFNAVARDFARQMKALGASEILPVWEGDVDGGDVDGVFDLWCAKIAGFLKGTVLENGGVSESSFGGECNAPSLEESEEDSDGENDMKSEIVDLEDIAGKAPSRKSVPVVETNGKLDGQREMVTPVIRANLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWKMDDPVEIVNSAIDLHSNMIKQMKGVPGVTLERLFEGLSPRHCALSLVGEPIMYPEINILVDELHKRRISTFLVTNAQFPEKIKLLKPITQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALREKEQRTVYRLTLVKGWNTEDVDAYFKLFSIGKPDFVEIKGVTYCGSSATSKLTMENVPWHADVKAFSEALALQSQGEYEVACEHVHSCCVLLAKTDKFKIDGQWYTWIDYEKFHDLVASGRPFTSKDYMAATPSWAVYGADEGGFDPAQLRYRKERHHKSSR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0240 642 MobiDBLite consensus disorder prediction 212 235 - -
Sto5g0240 642 CDD Radical_SAM 328 528 - -
Sto5g0240 642 SFLD tRNA wybutosine-synthesizing 268 578 IPR034556 GO:0008033|GO:0051539
Sto5g0240 642 PRINTS Flavodoxin signature 49 62 IPR001094 GO:0010181
Sto5g0240 642 PRINTS Flavodoxin signature 97 108 IPR001094 GO:0010181
Sto5g0240 642 PRINTS Flavodoxin signature 135 145 IPR001094 GO:0010181
Sto5g0240 642 PRINTS Flavodoxin signature 160 179 IPR001094 GO:0010181
Sto5g0240 642 SFLD tRNA wybutosine-synthesizing 268 578 - -
Sto5g0240 642 Pfam Wyosine base formation 511 574 IPR013917 -
Sto5g0240 642 Gene3D Aldolase class I 256 586 IPR013785 -
Sto5g0240 642 ProSiteProfiles Radical SAM core domain profile. 316 559 IPR007197 GO:0003824|GO:0051536
Sto5g0240 642 Gene3D - 26 205 IPR029039 -
Sto5g0240 642 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 3 639 IPR034556 GO:0008033|GO:0051539
Sto5g0240 642 SUPERFAMILY Radical SAM enzymes 329 509 - -
Sto5g0240 642 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 3 639 - -
Sto5g0240 642 ProSiteProfiles Flavodoxin-like domain profile. 48 196 IPR008254 GO:0010181
Sto5g0240 642 SUPERFAMILY Flavoproteins 49 199 IPR029039 -
Sto5g0240 642 Pfam Flavodoxin 50 181 IPR008254 GO:0010181
Sto5g0240 642 Pfam Radical SAM superfamily 328 507 IPR007197 GO:0003824|GO:0051536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0240 5 1400576 1404659 Sto5g0240 5 1400576 1404659 ECH