Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0234 ATGTCCTTGAACTCCAGAATCGAATGGCTCGCCTTGTTTCAGCTTCGCTCGTCCTTGGGGATTCATAGCAAAGAGTGGCCCAGAAAAACCGAGCCGTGCAGGAACTGGTCAGGGGTTCGGTGCGAGAACGGCCGGGTCGTTGGCATCAACGTGTCCGGTTTAAGACGAACCCGATTCGGGCGTCTCCATCCTCGATTCGCAGTAGATTCTCTTGCCAATTTCACGCTCTTAGCGTCGTTCGAAGCTTCTGGATTCTTGCTTAATGGCTCTATTCCTGAGTTGTTTGGACAGAGTCTTAGTTCTCTCGAAAAGCTCGATCTGAGTTCTTGCTCGCTCACGGGTTTGATTCCTTCATCGCTTGGGAATTTGAGTAGGCTGCAAACTCTGATTCTGTCAGATAATAGTCTCACTGGTAGAATGCCTTCCACATTGGGACAATTATCTAGTTTATCAGTTCTTAATCTCTCCAAGAATTCGCTTACTGCATCAATGCCTACCTCTTTCATATCTCTAGGTAATCTTACATTGCTTGAcctttcttctaattttttatCTGGCTCCATTCCAGACTATCTTGGTACTCTTTATAGTCTCGAGTCATTGAATCTCTCCGACAATGGCTTGACTTCTTCGATCCCTGTTCAATTGAGTAACCTTTCTCGGTTACTTGAGCTTGATCTCAGTATGAATTCTTTGTCTGGTTCATTGCCAGATGATTTGTTTTctaatattcttcttcttcgaaCTCTCAATCTTAGTCGTAATGCTTTTGATGGCACCCTTCCTTCTAATTTGTGGTCAATGCACAGCTTGTCCCTCCTTGATGTATCCACCAACAACCTTACTGGTCACCTTCCAAAACTTGGTTCACATGTTAATTCTTCTGGTGCCATCTTCAATCTGTCAAACAATTTCTTCTATGGATTTCTCGATTCTTCGTTGAAGAAATTTAGAATCATTGATTTGTCAAGTAATTATTTCCAAGGTAATGTGTCTGATTATGGTTTAAGTAATGTTACTCTAGCTATAAATTGCCTAATGAACCGTCCGAATCAAAGGAGTTATAGAGATTGTACAGAGTTTTATGTTCAGAAAAGAGAAACCTATATTGAAGCAGAGTCTAGAAACAACAGACGAGTGGTATTCATTGTGGCAGGTATATTTGGTGGGATCGGGTTTATTGTGATTCTAGTAATGGTCCTTGTTCTGCTTCTAGGAAAATGCGATAATAGCActgcaaataaaaaaataacagcaGATGTGGGACCTGTTCCAGAAGGGGAAAGTCCTAATCCTCCTAAGGATCACATGTTAGAAACTGGTATGGGAGAATCATTTAGTTATGAGCAAGTGCTCCATTTGACTGGTAACTTTGCTGAAACTAATATCATCAAGCATGGTCATTCTGGGGACTTGTTTTGGGGAGTGTTGGAAGGTGAAGTTAATGTGGTAGTGAAGAAGGTGGATTTGAACTTAGTCAAGAGGGAATCATACATGTTGGAGTTGGAACTGTTGAGCAAGGATTCACATACAAGATTGGTGCCGCTATTAGGGCACTGCttggagaatgagaatgagaaattTTTGGTTTACAAGTACATGCCAAATGGAGATTTGGCTAGTTCCTTGCACAGAGTGAGTGGGCCAGATGATAAAGTACAGTCTTTGGATTGGATCACCAGATTGAAAATTGCAATAGGAGCTGCTGAAGGCCTGTATTACCTGCATGACTGCAACCCTCCCGTTGTTCACAGAGATGTCCAAGCAAGCAGTATACTTCTTGATGATAAATTTGAAGTAAGACTAGGAAGTTTGAGTGCGGTTACTACACAAGGAGATCTTCATCAGAGTGTCATCACAAGGATATTCCGCAAGTCACATGATAAACAAACAGGTTCATCATCTGTGACATGTGCTTATGATGTATACTGTTTTGGAAAGGTCTTACTTGAGCTTGTTACTGGTAAGCTTGGTTGTAGCAGTACAGACGATGCCACCACAAGAGAATGGATAGAGCAGACCTTGTCTTACATAAGCATATATGACAAAGAACAGGTGACAAAGATAGTAGACCCATCTCTCATAGTAGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAGGTCATGCCTCAACCCCAAGCCTTTTAAGCGCCCTCCAATAGCCTATGTGCTAAAAGCACTAGAAAATCCATTGAAGATAGTGAGAGAAGAAAATAGTAGCTCAGCGAGATTGAGAACAACTTCATCAAGAAGATCTTGGAGTACAGCATTCTTTGGCAGCTGGAGACAGAGCTCATCAGAGAGTGCTACTGCTACTGCAAACAGAGAGGGTTTTGGTGTTGGTGGCTTTAAACAAACAGGAAGAGTAGGGTCTCAGGGTAGTGGTGGAAATGATCACTCTTCTTCCCGTAAAAGGTTATCCAGTGAAATTTTCCCTGAACCATTAGAAATACAAGAGGTGGAGACTGGAGAGGCAAGATAA 2496 0.4115 MSLNSRIEWLALFQLRSSLGIHSKEWPRKTEPCRNWSGVRCENGRVVGINVSGLRRTRFGRLHPRFAVDSLANFTLLASFEASGFLLNGSIPELFGQSLSSLEKLDLSSCSLTGLIPSSLGNLSRLQTLILSDNSLTGRMPSTLGQLSSLSVLNLSKNSLTASMPTSFISLGNLTLLDLSSNFLSGSIPDYLGTLYSLESLNLSDNGLTSSIPVQLSNLSRLLELDLSMNSLSGSLPDDLFSNILLLRTLNLSRNAFDGTLPSNLWSMHSLSLLDVSTNNLTGHLPKLGSHVNSSGAIFNLSNNFFYGFLDSSLKKFRIIDLSSNYFQGNVSDYGLSNVTLAINCLMNRPNQRSYRDCTEFYVQKRETYIEAESRNNRRVVFIVAGIFGGIGFIVILVMVLVLLLGKCDNSTANKKITADVGPVPEGESPNPPKDHMLETGMGESFSYEQVLHLTGNFAETNIIKHGHSGDLFWGVLEGEVNVVVKKVDLNLVKRESYMLELELLSKDSHTRLVPLLGHCLENENEKFLVYKYMPNGDLASSLHRVSGPDDKVQSLDWITRLKIAIGAAEGLYYLHDCNPPVVHRDVQASSILLDDKFEVRLGSLSAVTTQGDLHQSVITRIFRKSHDKQTGSSSVTCAYDVYCFGKVLLELVTGKLGCSSTDDATTREWIEQTLSYISIYDKEQVTKIVDPSLIVDEDLLEEVWAMAIVARSCLNPKPFKRPPIAYVLKALENPLKIVREENSSSARLRTTSSRRSWSTAFFGSWRQSSSESATATANREGFGVGGFKQTGRVGSQGSGGNDHSSSRKRLSSEIFPEPLEIQEVETGEAR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0234 831 Pfam Leucine rich repeat 124 182 IPR001611 GO:0005515
Sto5g0234 831 ProSiteProfiles Protein kinase domain profile. 458 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto5g0234 831 SUPERFAMILY L domain-like 13 286 - -
Sto5g0234 831 Pfam Leucine Rich Repeat 101 123 IPR001611 GO:0005515
Sto5g0234 831 Gene3D Phosphorylase Kinase; domain 1 431 533 - -
Sto5g0234 831 Gene3D Ribonuclease Inhibitor 8 163 IPR032675 -
Sto5g0234 831 Gene3D Ribonuclease Inhibitor 243 340 IPR032675 -
Sto5g0234 831 Gene3D Ribonuclease Inhibitor 164 242 IPR032675 -
Sto5g0234 831 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 9 244 - -
Sto5g0234 831 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 259 786 - -
Sto5g0234 831 ProSiteProfiles Leucine-rich repeat profile. 197 220 IPR001611 GO:0005515
Sto5g0234 831 MobiDBLite consensus disorder prediction 792 806 - -
Sto5g0234 831 SUPERFAMILY Protein kinase-like (PK-like) 434 732 IPR011009 -
Sto5g0234 831 SMART LRR_typ_2 268 291 IPR003591 -
Sto5g0234 831 SMART LRR_typ_2 147 170 IPR003591 -
Sto5g0234 831 SMART LRR_typ_2 99 122 IPR003591 -
Sto5g0234 831 SMART LRR_typ_2 195 218 IPR003591 -
Sto5g0234 831 SMART LRR_typ_2 219 243 IPR003591 -
Sto5g0234 831 SMART LRR_typ_2 123 146 IPR003591 -
Sto5g0234 831 SMART LRR_typ_2 171 193 IPR003591 -
Sto5g0234 831 Gene3D Transferase(Phosphotransferase) domain 1 534 755 - -
Sto5g0234 831 ProSiteProfiles cAMP/cGMP binding motif profile. 463 512 IPR000595 -
Sto5g0234 831 PANTHER RECEPTOR-LIKE PROTEIN 55 259 786 - -
Sto5g0234 831 PANTHER RECEPTOR-LIKE PROTEIN 55 9 244 - -
Sto5g0234 831 Pfam Protein tyrosine and serine/threonine kinase 463 672 IPR001245 GO:0004672|GO:0006468
Sto5g0234 831 MobiDBLite consensus disorder prediction 773 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0234 Sto-Chr5 1363758 1366826 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Sto5g0234 PK_Tyr_Ser-Thr 6.3e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0234 5 1363758 1366826 Sto5g0234 5 1363758 1366826 ECH