Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0212 ATGTTCAGAAACCAGTACGACACGGACGTCACGACATGGAGTCCGGCCGGGAGATTGTTCCAGGTGGAGTACGCAATGGAGGCGGTCAAACAAGGATCCGCCGCTATAGGGCTCCGATCTAAGACTCACGTGGTACTGGCTTGCGTTAACAAGGCTAACTCGGACCTCTCCTCCCACCAGAAGAAGATTTTCAAGGTTGATGACCACATCGGGGTTGCCATTGCTGGCCTCACCGCCGATGGCCGAGTTCTCTCCCGTTACATGCGATCCGAGTGCATCAACTACAGCTATACCTACGAGTCACCGCTTCCCGTGGGTCGACTCGTTGTTCAACTCGCCGATAAGGCTCAGGTATGCACCCAACGATCATGGAAACGGCCTTACGGAGTTGGTCTCTTGGTAGCTGGATTAGATGAATCTGGAGCTCATCTCTATTACAACTGCCCGAGCGGGAACTACTTTGAATATCAGGCATTTGCAATCGGGTCTCGTTCACAAGCAGCAAAGACTTATTTAGAACGAAGATTTGAGAACTTCATGGGCTCCTCTAGGGAAGATCTGATCAAGGATGCACTTATTGCAACAAGGGAAACCTTGCAAGGGGAAAAACTCACGAGTTCCATATGTACAATAGCTGTAGTTGGAGTTGGTGAGGCATTCCACATATTGGATCAAGAAACTGTACAGCAGTTGATTGATGCCTTTGAGATTGTGAGAGAGGAAGAAAGTCCTCCTGCTCAACCTCAGCCAACAGCTGAGCCTGCTGCTCAGGCTTCTGGCGCGGATCAGGCTGCTACCACAGAGCAAGGAGATGTTGCTCCAATGgacatttga 834 0.5012 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSDLSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFMGSSREDLIKDALIATRETLQGEKLTSSICTIAVVGVGEAFHILDQETVQQLIDAFEIVREEESPPAQPQPTAEPAAQASGADQAATTEQGDVAPMDI 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0212 277 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
Sto5g0212 277 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Sto5g0212 277 MobiDBLite consensus disorder prediction 252 266 - -
Sto5g0212 277 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 1 261 - -
Sto5g0212 277 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 234 IPR029055 -
Sto5g0212 277 MobiDBLite consensus disorder prediction 240 277 - -
Sto5g0212 277 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Sto5g0212 277 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Sto5g0212 277 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Sto5g0212 277 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 261 - -
Sto5g0212 277 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
Sto5g0212 277 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 232 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0212 Sto-Chr5 1276734 1278881 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0212 5 1276734 1278881 Sto5g0212 5 1276734 1278881 ECH