Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0208 ATGAGCAATTGCATCAACAGTGGCATCAGAAAAATATACGTCTTAACGCAATTCAACTCTTTCTCCCTCAATCGCCACTTGTCTACCACATATAATTTTGGAAACGGCATGAGCTTTGGCGACGCTTTTGTCGagGTCTTGGCTGCTACCCAAACACCTGGAACTGCCGGAAAAAGATGGTTCCAAGGTACAGCTGATGCAGTTAGGCAATTTATTTGGGTATTTGAGGATGCCAAGAACAAGAATGTTGAGAATATAGTGATACTTTCTGGTGATCATCTTTACCGGATGGACTACATGAAGTTTGTGCAGAAACACTTGGACACAAATGCTGATATCACAGTTTCATGCGTACCCATGGACTATAGTCGTGCATCAGATTATGGGCTGATGAAAGTTGATAAGTCAGGACGGATTACAGAGTTTGCAGAAAAACCAGAGGGATCCGATCTGGAGGCAATGGAAGTTGACACGAGTCTCCTAGGCTTATCTCCACAAGAAGCACGCGAATATCCTTTCATTGCATCAATGGGTGTTTATGTATTCAGAACTGAGACCCTTCTCAAACTATTGAGATGGAGCTATCCTTTTTCCAATGACTTCGGATCCGAAATTATTCCAGCTGCTCTCAGGGAGCACAATGTCCAAGCATATTTGTTTAATCACTACTGGGAAGATATTGGAACTATAAAGTCCTTCTTTGACGCCAATCTCGCCCTAACACAGCAGCCTCCAAAGTTCGATTTCAATGATCCAAAGACTCCTTTCTTCACGTCTCCAAGATATTTACCACCCACTAAAGTAGAAAATTGCAAGATCACAGAGGCAATTGTTTCTCATGGTTGCTTTTTAAGGGACTGTACAATTCACCATTCTGTAGTTGGTCTACGCTCACGATTAGAGTCTGGTGTAGAGCTTGTGGATACCATGATGATGGGAGCAGACTCTTATCAAACTGACTCCGAAATCGCATGTCTACTCGCACAAGGAAAGGTTCCAGTTGGTGTTGGAGAGAATACCAAAATCAGGAATTGTATAATCGACAAGAATGCCAAGATTGGGAGAAATGTGGTTATTGCAAATAGTGAGGGTGTTGAGGAAGCTGACAGGGCTGATGAAGGATTCTACATCAAGTCAGGCATCACAATTATCATGAAGGATGCCACAATTGAAGATGGAACACTTATCTAA 1191 0.4232 MSNCINSGIRKIYVLTQFNSFSLNRHLSTTYNFGNGMSFGDAFVEVLAATQTPGTAGKRWFQGTADAVRQFIWVFEDAKNKNVENIVILSGDHLYRMDYMKFVQKHLDTNADITVSCVPMDYSRASDYGLMKVDKSGRITEFAEKPEGSDLEAMEVDTSLLGLSPQEAREYPFIASMGVYVFRTETLLKLLRWSYPFSNDFGSEIIPAALREHNVQAYLFNHYWEDIGTIKSFFDANLALTQQPPKFDFNDPKTPFFTSPRYLPPTKVENCKITEAIVSHGCFLRDCTIHHSVVGLRSRLESGVELVDTMMMGADSYQTDSEIACLLAQGKVPVGVGENTKIRNCIIDKNAKIGRNVVIANSEGVEEADRADEGFYIKSGITIIMKDATIEDGTLI 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0208 396 Gene3D Hexapeptide repeat proteins 262 396 - -
Sto5g0208 396 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 396 IPR011831 GO:0005978|GO:0008878
Sto5g0208 396 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 358 IPR029044 -
Sto5g0208 396 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 175 185 IPR005836 GO:0005978|GO:0008878
Sto5g0208 396 SUPERFAMILY Trimeric LpxA-like enzymes 258 396 IPR011004 -
Sto5g0208 396 CDD LbH_G1P_AT_C 264 390 - -
Sto5g0208 396 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 396 - -
Sto5g0208 396 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 60 68 IPR005836 GO:0005978|GO:0008878
Sto5g0208 396 Pfam Nucleotidyl transferase 1 242 IPR005835 GO:0009058|GO:0016779
Sto5g0208 396 CDD ADP_Glucose_PP 1 227 - -
Sto5g0208 396 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 261 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0208 Sto-Chr5 1250133 1252110 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0208 5 1250133 1252110 Sto5g0208 5 1250133 1252110 ECH